Cluster: A19.bin_36_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.bin_36
- CGC Family ID: CGCFAM_04350
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_1159 | 1209827 | 1211071 | - | GT4 |
| TC | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_1160 | 1211083 | 1211736 | - | 9.B.18.1.2 |
| STP | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_1161 | 1211762 | 1212961 | - | Aminotran_1_2 |
| pfam | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_1162 | 1213245 | 1214081 | + | BacA |
| TC | A19_contig_255_corr_4_s1_np12 | A19_contig_255_corr_4_s1_np12_1163 | 1214127 | 1216667 | + | 3.A.12.1.1 |
Gene ID: A19_contig_255_corr_4_s1_np12_1159
Type: CAZyme
Location: 1209827 - 1211071 (-)
Type: CAZyme
Location: 1209827 - 1211071 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_1160
Type: TC
Location: 1211083 - 1211736 (-)
Type: TC
Location: 1211083 - 1211736 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_1161
Type: STP
Location: 1211762 - 1212961 (-)
Type: STP
Location: 1211762 - 1212961 (-)
Gene ID: A19_contig_255_corr_4_s1_np12_1162
Type: pfam
Location: 1213245 - 1214081 (+)
Type: pfam
Location: 1213245 - 1214081 (+)
Gene ID: A19_contig_255_corr_4_s1_np12_1163
Type: TC
Location: 1214127 - 1216667 (+)
Type: TC
Location: 1214127 - 1216667 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp003539495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.