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Cluster: A19.bin_12_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A19_contig_4994 A19_contig_4994_151 171523 173244 + 3.A.1.135.5
TC A19_contig_4994 A19_contig_4994_152 173241 175043 + 3.A.1.135.5
TC A19_contig_4994 A19_contig_4994_153 175316 176113 - 2.A.5.5.5
pfam A19_contig_4994 A19_contig_4994_154 176347 177630 + Cys_Met_Meta_PP
pfam A19_contig_4994 A19_contig_4994_155 177647 178579 + HTS
TC A19_contig_4994 A19_contig_4994_156 179414 180493 + 3.A.1.2.3
TC A19_contig_4994 A19_contig_4994_157 180604 182109 + 3.A.1.2.3
TC A19_contig_4994 A19_contig_4994_158 182122 183123 + 3.A.1.2.3
TF A19_contig_4994 A19_contig_4994_159 183148 184167 + LacI
CAZyme A19_contig_4994 A19_contig_4994_160 184272 185933 + GH13_31
Gene ID: A19_contig_4994_151
Type: TC
Location: 171523 - 173244 (+)
Gene ID: A19_contig_4994_152
Type: TC
Location: 173241 - 175043 (+)
Gene ID: A19_contig_4994_153
Type: TC
Location: 175316 - 176113 (-)
Gene ID: A19_contig_4994_154
Type: pfam
Location: 176347 - 177630 (+)
Gene ID: A19_contig_4994_155
Type: pfam
Location: 177647 - 178579 (+)
Gene ID: A19_contig_4994_156
Type: TC
Location: 179414 - 180493 (+)
Gene ID: A19_contig_4994_157
Type: TC
Location: 180604 - 182109 (+)
Gene ID: A19_contig_4994_158
Type: TC
Location: 182122 - 183123 (+)
Gene ID: A19_contig_4994_159
Type: TF
Location: 183148 - 184167 (+)
Gene ID: A19_contig_4994_160
Type: CAZyme
Location: 184272 - 185933 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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