Cluster: A19.CMAG_6_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A19.CMAG_6
- CGC Family ID: CGCFAM_01558
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_3938 | A19_contig_3938_434 | 499794 | 501416 | - | GH26 |
| pfam | A19_contig_3938 | A19_contig_3938_435 | 501413 | 503449 | - | PilM_2 | FtsA |
| TC | A19_contig_3938 | A19_contig_3938_436 | 503477 | 504139 | - | 2.A.38.1.1 |
| STP | A19_contig_3938 | A19_contig_3938_437 | 504163 | 504708 | - | NUDIX |
| CAZyme | A19_contig_3938 | A19_contig_3938_438 | 504705 | 505892 | - | GH130_1 |
Gene ID: A19_contig_3938_434
Type: CAZyme
Location: 499794 - 501416 (-)
Type: CAZyme
Location: 499794 - 501416 (-)
Gene ID: A19_contig_3938_435
Type: pfam
Location: 501413 - 503449 (-)
Type: pfam
Location: 501413 - 503449 (-)
Gene ID: A19_contig_3938_436
Type: TC
Location: 503477 - 504139 (-)
Type: TC
Location: 503477 - 504139 (-)
Gene ID: A19_contig_3938_437
Type: STP
Location: 504163 - 504708 (-)
Type: STP
Location: 504163 - 504708 (-)
Gene ID: A19_contig_3938_438
Type: CAZyme
Location: 504705 - 505892 (-)
Type: CAZyme
Location: 504705 - 505892 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A19_contig_3938_437 | vegetarian > vegan | 1.22929 | 0.03157 |