Cluster: A19.CMAG_6_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: A19.CMAG_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_3938 | A19_contig_3938_203 | 233129 | 235525 | + | GT35 |
| CAZyme | A19_contig_3938 | A19_contig_3938_204 | 235646 | 237532 | + | GH13_39 |
| TC | A19_contig_3938 | A19_contig_3938_205 | 237739 | 239136 | - | 2.A.66.1.25 |
| TC | A19_contig_3938 | A19_contig_3938_206 | 239702 | 240349 | + | 2.A.87.1.3 |
| pfam | A19_contig_3938 | A19_contig_3938_207 | 240394 | 240939 | + | DUF5662 |
| CAZyme | A19_contig_3938 | A19_contig_3938_208 | 241153 | 243453 | + | GT51 |
Gene ID: A19_contig_3938_203
Type: CAZyme
Location: 233129 - 235525 (+)
Type: CAZyme
Location: 233129 - 235525 (+)
Gene ID: A19_contig_3938_204
Type: CAZyme
Location: 235646 - 237532 (+)
Type: CAZyme
Location: 235646 - 237532 (+)
Gene ID: A19_contig_3938_205
Type: TC
Location: 237739 - 239136 (-)
Type: TC
Location: 237739 - 239136 (-)
Gene ID: A19_contig_3938_206
Type: TC
Location: 239702 - 240349 (+)
Type: TC
Location: 239702 - 240349 (+)
Gene ID: A19_contig_3938_207
Type: pfam
Location: 240394 - 240939 (+)
Type: pfam
Location: 240394 - 240939 (+)
Gene ID: A19_contig_3938_208
Type: CAZyme
Location: 241153 - 243453 (+)
Type: CAZyme
Location: 241153 - 243453 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.