Cluster: A19.CMAG_6_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.CMAG_6
- CGC Family ID: CGCFAM_06709
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A19_contig_3938 | A19_contig_3938_2257 | 2475058 | 2476398 | + | 1.A.34.1.1 |
| STP | A19_contig_3938 | A19_contig_3938_2258 | 2476748 | 2478664 | + | GGDEF | Peripla_BP_3 |
| CAZyme | A19_contig_3938 | A19_contig_3938_2259 | 2478839 | 2479846 | - | GH130_2 |
| STP | A19_contig_3938 | A19_contig_3938_2260 | 2479998 | 2481956 | - | EAL |
| pfam | A19_contig_3938 | A19_contig_3938_2261 | 2482093 | 2482536 | - | RNase_H |
| TC | A19_contig_3938 | A19_contig_3938_2262 | 2482595 | 2483776 | - | 3.A.1.1.11 |
Gene ID: A19_contig_3938_2257
Type: TC
Location: 2475058 - 2476398 (+)
Type: TC
Location: 2475058 - 2476398 (+)
Gene ID: A19_contig_3938_2258
Type: STP
Location: 2476748 - 2478664 (+)
Type: STP
Location: 2476748 - 2478664 (+)
Gene ID: A19_contig_3938_2259
Type: CAZyme
Location: 2478839 - 2479846 (-)
Type: CAZyme
Location: 2478839 - 2479846 (-)
Gene ID: A19_contig_3938_2260
Type: STP
Location: 2479998 - 2481956 (-)
Type: STP
Location: 2479998 - 2481956 (-)
Gene ID: A19_contig_3938_2261
Type: pfam
Location: 2482093 - 2482536 (-)
Type: pfam
Location: 2482093 - 2482536 (-)
Gene ID: A19_contig_3938_2262
Type: TC
Location: 2482595 - 2483776 (-)
Type: TC
Location: 2482595 - 2483776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.