Cluster: A19.CMAG_6_CGC21
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.CMAG_6
- CGC Family ID: CGCFAM_04363
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A19_contig_3938 | A19_contig_3938_1931 | 2127437 | 2128690 | - | 9.A.40.2.4 |
| pfam | A19_contig_3938 | A19_contig_3938_1932 | 2128694 | 2129026 | - | Glutaredoxin | ArsC |
| pfam | A19_contig_3938 | A19_contig_3938_1933 | 2129042 | 2129845 | - | S6PP | S6PP | Hydrolase_3 |
| TC | A19_contig_3938 | A19_contig_3938_1934 | 2130282 | 2132396 | - | 1.B.52.2.1 |
| NULL(UNKNOWN) | A19_contig_3938 | A19_contig_3938_1935 | 2132714 | 2132992 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A19_contig_3938 | A19_contig_3938_1936 | 2133007 | 2134191 | + | YqfD |
| TC | A19_contig_3938 | A19_contig_3938_1937 | 2134192 | 2136273 | - | 3.A.7.7.1 |
| NULL(UNKNOWN) | A19_contig_3938 | A19_contig_3938_1938 | 2136350 | 2136478 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | A19_contig_3938 | A19_contig_3938_1939 | 2137045 | 2138082 | - | S1_4 |
| TC | A19_contig_3938 | A19_contig_3938_1940 | 2138103 | 2140259 | - | 1.B.52.2.2 |
| CAZyme | A19_contig_3938 | A19_contig_3938_1941 | 2140385 | 2142427 | - | GH3 |
Gene ID: A19_contig_3938_1931
Type: TC
Location: 2127437 - 2128690 (-)
Type: TC
Location: 2127437 - 2128690 (-)
Gene ID: A19_contig_3938_1932
Type: pfam
Location: 2128694 - 2129026 (-)
Type: pfam
Location: 2128694 - 2129026 (-)
Gene ID: A19_contig_3938_1933
Type: pfam
Location: 2129042 - 2129845 (-)
Type: pfam
Location: 2129042 - 2129845 (-)
Gene ID: A19_contig_3938_1934
Type: TC
Location: 2130282 - 2132396 (-)
Type: TC
Location: 2130282 - 2132396 (-)
Gene ID: A19_contig_3938_1935
Type:
Location: 2132714 - 2132992 (+)
Type:
Location: 2132714 - 2132992 (+)
Gene ID: A19_contig_3938_1936
Type: pfam
Location: 2133007 - 2134191 (+)
Type: pfam
Location: 2133007 - 2134191 (+)
Gene ID: A19_contig_3938_1937
Type: TC
Location: 2134192 - 2136273 (-)
Type: TC
Location: 2134192 - 2136273 (-)
Gene ID: A19_contig_3938_1938
Type:
Location: 2136350 - 2136478 (+)
Type:
Location: 2136350 - 2136478 (+)
Gene ID: A19_contig_3938_1939
Type: sulfatase
Location: 2137045 - 2138082 (-)
Type: sulfatase
Location: 2137045 - 2138082 (-)
Gene ID: A19_contig_3938_1940
Type: TC
Location: 2138103 - 2140259 (-)
Type: TC
Location: 2138103 - 2140259 (-)
Gene ID: A19_contig_3938_1941
Type: CAZyme
Location: 2140385 - 2142427 (-)
Type: CAZyme
Location: 2140385 - 2142427 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A19_contig_3938_1937 | vegetarian > vegan | 1.06275 | 0.03157 |