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Cluster: A19.CMAG_6_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A19_contig_3938 A19_contig_3938_1920 2116495 2117178 - GT51
NULL(UNKNOWN) A19_contig_3938 A19_contig_3938_1921 2117201 2117335 - NULL(UNKNOWN)
[View Structural Homologs]
TC A19_contig_3938 A19_contig_3938_1922 2117332 2119335 - 3.A.1.134.9
TC A19_contig_3938 A19_contig_3938_1923 2119332 2120129 - 3.A.1.134.4
STP A19_contig_3938 A19_contig_3938_1924 2120352 2121326 - HATPase_c
TF A19_contig_3938 A19_contig_3938_1925 2121323 2121994 - Trans_reg_C
TC A19_contig_3938 A19_contig_3938_1926 2122130 2123944 - 9.B.34.1.2
Gene ID: A19_contig_3938_1920
Type: CAZyme
Location: 2116495 - 2117178 (-)
Gene ID: A19_contig_3938_1921
Type:
Location: 2117201 - 2117335 (-)
Gene ID: A19_contig_3938_1922
Type: TC
Location: 2117332 - 2119335 (-)
Gene ID: A19_contig_3938_1923
Type: TC
Location: 2119332 - 2120129 (-)
Gene ID: A19_contig_3938_1924
Type: STP
Location: 2120352 - 2121326 (-)
Gene ID: A19_contig_3938_1925
Type: TF
Location: 2121323 - 2121994 (-)
Gene ID: A19_contig_3938_1926
Type: TC
Location: 2122130 - 2123944 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A19_contig_3938_1923 vegetarian > vegan 1.19562 0.02801

🧭 Explore Read Mapping of CGC

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