Cluster: A19.CMAG_6_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.CMAG_6
- CGC Family ID: CGCFAM_01296
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_3938 | A19_contig_3938_1920 | 2116495 | 2117178 | - | GT51 |
| NULL(UNKNOWN) | A19_contig_3938 | A19_contig_3938_1921 | 2117201 | 2117335 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A19_contig_3938 | A19_contig_3938_1922 | 2117332 | 2119335 | - | 3.A.1.134.9 |
| TC | A19_contig_3938 | A19_contig_3938_1923 | 2119332 | 2120129 | - | 3.A.1.134.4 |
| STP | A19_contig_3938 | A19_contig_3938_1924 | 2120352 | 2121326 | - | HATPase_c |
| TF | A19_contig_3938 | A19_contig_3938_1925 | 2121323 | 2121994 | - | Trans_reg_C |
| TC | A19_contig_3938 | A19_contig_3938_1926 | 2122130 | 2123944 | - | 9.B.34.1.2 |
Gene ID: A19_contig_3938_1920
Type: CAZyme
Location: 2116495 - 2117178 (-)
Type: CAZyme
Location: 2116495 - 2117178 (-)
Gene ID: A19_contig_3938_1921
Type:
Location: 2117201 - 2117335 (-)
Type:
Location: 2117201 - 2117335 (-)
Gene ID: A19_contig_3938_1922
Type: TC
Location: 2117332 - 2119335 (-)
Type: TC
Location: 2117332 - 2119335 (-)
Gene ID: A19_contig_3938_1923
Type: TC
Location: 2119332 - 2120129 (-)
Type: TC
Location: 2119332 - 2120129 (-)
Gene ID: A19_contig_3938_1924
Type: STP
Location: 2120352 - 2121326 (-)
Type: STP
Location: 2120352 - 2121326 (-)
Gene ID: A19_contig_3938_1925
Type: TF
Location: 2121323 - 2121994 (-)
Type: TF
Location: 2121323 - 2121994 (-)
Gene ID: A19_contig_3938_1926
Type: TC
Location: 2122130 - 2123944 (-)
Type: TC
Location: 2122130 - 2123944 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A19_contig_3938_1923 | vegetarian > vegan | 1.19562 | 0.02801 |