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Cluster: A19.CMAG_6_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A19_contig_3938 A19_contig_3938_1794 1996358 1998262 - GH13_14
CAZyme A19_contig_3938 A19_contig_3938_1795 1998277 1999935 - GH13_36
TF A19_contig_3938 A19_contig_3938_1796 1999932 2000963 - LacI
TC A19_contig_3938 A19_contig_3938_1797 2001004 2001879 - 3.A.1.1.27
TC A19_contig_3938 A19_contig_3938_1798 2001879 2003375 - 3.A.1.1.27
TC A19_contig_3938 A19_contig_3938_1799 2003617 2004930 - 3.A.1.1.27
CAZyme A19_contig_3938 A19_contig_3938_1800 2005316 2007676 - GT35
CAZyme A19_contig_3938 A19_contig_3938_1801 2007696 2009210 - GH77
Gene ID: A19_contig_3938_1794
Type: CAZyme
Location: 1996358 - 1998262 (-)
Gene ID: A19_contig_3938_1795
Type: CAZyme
Location: 1998277 - 1999935 (-)
Gene ID: A19_contig_3938_1796
Type: TF
Location: 1999932 - 2000963 (-)
Gene ID: A19_contig_3938_1797
Type: TC
Location: 2001004 - 2001879 (-)
Gene ID: A19_contig_3938_1798
Type: TC
Location: 2001879 - 2003375 (-)
Gene ID: A19_contig_3938_1799
Type: TC
Location: 2003617 - 2004930 (-)
Gene ID: A19_contig_3938_1800
Type: CAZyme
Location: 2005316 - 2007676 (-)
Gene ID: A19_contig_3938_1801
Type: CAZyme
Location: 2007696 - 2009210 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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