Cluster: A19.CMAG_6_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.CMAG_6
- CGC Family ID: CGCFAM_00977
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A19_contig_3938 | A19_contig_3938_1747 | 1945708 | 1946094 | - | 9.B.70.1.1 |
| pfam | A19_contig_3938 | A19_contig_3938_1748 | 1946101 | 1946298 | - | SpoIIIAC |
| pfam | A19_contig_3938 | A19_contig_3938_1749 | 1946309 | 1946797 | - | Spore_III_AB |
| TC | A19_contig_3938 | A19_contig_3938_1750 | 1946794 | 1947654 | - | 9.B.70.1.1 |
| CAZyme | A19_contig_3938 | A19_contig_3938_1751 | 1947754 | 1948800 | - | GT4 |
Gene ID: A19_contig_3938_1747
Type: TC
Location: 1945708 - 1946094 (-)
Type: TC
Location: 1945708 - 1946094 (-)
Gene ID: A19_contig_3938_1748
Type: pfam
Location: 1946101 - 1946298 (-)
Type: pfam
Location: 1946101 - 1946298 (-)
Gene ID: A19_contig_3938_1749
Type: pfam
Location: 1946309 - 1946797 (-)
Type: pfam
Location: 1946309 - 1946797 (-)
Gene ID: A19_contig_3938_1750
Type: TC
Location: 1946794 - 1947654 (-)
Type: TC
Location: 1946794 - 1947654 (-)
Gene ID: A19_contig_3938_1751
Type: CAZyme
Location: 1947754 - 1948800 (-)
Type: CAZyme
Location: 1947754 - 1948800 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A19_contig_3938_1748 | vegetarian > vegan | 1.28737 | 0.03157 |