Cluster: A19.CMAG_6_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: beta-glucan
- Genome ID: A19.CMAG_6
- CGC Family ID: CGCFAM_00083
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_3938 | A19_contig_3938_1451 | 1611586 | 1615059 | - | GH2 |
| CAZyme | A19_contig_3938 | A19_contig_3938_1452 | 1615064 | 1618051 | - | GH2 |
| TF | A19_contig_3938 | A19_contig_3938_1453 | 1618162 | 1618980 | + | HTH_AraC |
| NULL(UNKNOWN) | A19_contig_3938 | A19_contig_3938_1454 | 1619492 | 1619713 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A19_contig_3938 | A19_contig_3938_1455 | 1619710 | 1621776 | + | 3.A.3.32.6 |
Gene ID: A19_contig_3938_1451
Type: CAZyme
Location: 1611586 - 1615059 (-)
Type: CAZyme
Location: 1611586 - 1615059 (-)
Gene ID: A19_contig_3938_1452
Type: CAZyme
Location: 1615064 - 1618051 (-)
Type: CAZyme
Location: 1615064 - 1618051 (-)
Gene ID: A19_contig_3938_1453
Type: TF
Location: 1618162 - 1618980 (+)
Type: TF
Location: 1618162 - 1618980 (+)
Gene ID: A19_contig_3938_1454
Type:
Location: 1619492 - 1619713 (+)
Type:
Location: 1619492 - 1619713 (+)
Gene ID: A19_contig_3938_1455
Type: TC
Location: 1619710 - 1621776 (+)
Type: TC
Location: 1619710 - 1621776 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.