Cluster: A19.CMAG_6_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.CMAG_6
- CGC Family ID: CGCFAM_04362
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A19_contig_3938 | A19_contig_3938_1308 | 1458003 | 1458758 | + | CE4 |
| pfam | A19_contig_3938 | A19_contig_3938_1309 | 1458806 | 1459393 | - | MMR_HSR1 | FeoB_N |
| STP | A19_contig_3938 | A19_contig_3938_1310 | 1459402 | 1461819 | - | AAA |
| TC | A19_contig_3938 | A19_contig_3938_1311 | 1462138 | 1462914 | - | 9.B.169.2.2 |
Gene ID: A19_contig_3938_1308
Type: CAZyme
Location: 1458003 - 1458758 (+)
Type: CAZyme
Location: 1458003 - 1458758 (+)
Gene ID: A19_contig_3938_1309
Type: pfam
Location: 1458806 - 1459393 (-)
Type: pfam
Location: 1458806 - 1459393 (-)
Gene ID: A19_contig_3938_1310
Type: STP
Location: 1459402 - 1461819 (-)
Type: STP
Location: 1459402 - 1461819 (-)
Gene ID: A19_contig_3938_1311
Type: TC
Location: 1462138 - 1462914 (-)
Type: TC
Location: 1462138 - 1462914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A19_contig_3938_1308 | vegetarian > vegan | 1.03308 | 0.03157 |