Cluster: A19.CMAG_6_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A19.CMAG_6
- CGC Family ID: CGCFAM_04361
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A19_contig_3938 | A19_contig_3938_1093 | 1212308 | 1213033 | + | 3.A.1.122.14 |
| NULL(UNKNOWN) | A19_contig_3938 | A19_contig_3938_1094 | 1213026 | 1216232 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A19_contig_3938 | A19_contig_3938_1095 | 1216269 | 1217636 | + | 3.A.1.122.12 |
| pfam | A19_contig_3938 | A19_contig_3938_1096 | 1217873 | 1219090 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | A19_contig_3938 | A19_contig_3938_1097 | 1219177 | 1220889 | - | CBM2 | GH5_2 |
Gene ID: A19_contig_3938_1093
Type: TC
Location: 1212308 - 1213033 (+)
Type: TC
Location: 1212308 - 1213033 (+)
Gene ID: A19_contig_3938_1094
Type:
Location: 1213026 - 1216232 (+)
Type:
Location: 1213026 - 1216232 (+)
Gene ID: A19_contig_3938_1095
Type: TC
Location: 1216269 - 1217636 (+)
Type: TC
Location: 1216269 - 1217636 (+)
Gene ID: A19_contig_3938_1096
Type: pfam
Location: 1217873 - 1219090 (+)
Type: pfam
Location: 1217873 - 1219090 (+)
Gene ID: A19_contig_3938_1097
Type: CAZyme
Location: 1219177 - 1220889 (-)
Type: CAZyme
Location: 1219177 - 1220889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003507295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.