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Cluster: A19.CMAG_6_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A19_contig_3938 A19_contig_3938_866 971109 972419 - GH43_35
TC A19_contig_3938 A19_contig_3938_867 972675 974339 + 1.B.52.2.2
TC A19_contig_3938 A19_contig_3938_868 974391 975275 - 2.A.7.2.1
pfam A19_contig_3938 A19_contig_3938_869 975580 977373 - MCRA | NAD_binding_8
TF A19_contig_3938 A19_contig_3938_870 977533 978087 - HTH_AraC
TC A19_contig_3938 A19_contig_3938_871 978265 979746 + 2.A.86.1.8
pfam A19_contig_3938 A19_contig_3938_872 979983 981506 + FapA | FapA_N
NULL(UNKNOWN) A19_contig_3938 A19_contig_3938_873 981584 982138 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A19_contig_3938 A19_contig_3938_874 982138 985536 + GH2
Gene ID: A19_contig_3938_866
Type: CAZyme
Location: 971109 - 972419 (-)
Gene ID: A19_contig_3938_867
Type: TC
Location: 972675 - 974339 (+)
Gene ID: A19_contig_3938_868
Type: TC
Location: 974391 - 975275 (-)
Gene ID: A19_contig_3938_869
Type: pfam
Location: 975580 - 977373 (-)
Gene ID: A19_contig_3938_870
Type: TF
Location: 977533 - 978087 (-)
Gene ID: A19_contig_3938_871
Type: TC
Location: 978265 - 979746 (+)
Gene ID: A19_contig_3938_872
Type: pfam
Location: 979983 - 981506 (+)
Gene ID: A19_contig_3938_873
Type:
Location: 981584 - 982138 (+)
Gene ID: A19_contig_3938_874
Type: CAZyme
Location: 982138 - 985536 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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