dbCAN HGM

Cluster: A19.CMAG_6_CGC10

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	A19_contig_3938	A19_contig_3938_603	675831	676418	-	2.A.107.1.2
pfam	A19_contig_3938	A19_contig_3938_604	677115	678170	+	ABC_sub_bind
TC	A19_contig_3938	A19_contig_3938_605	678212	679930	+	3.A.1.34.1
TC	A19_contig_3938	A19_contig_3938_606	680008	681846	+	2.A.16.2.2
pfam	A19_contig_3938	A19_contig_3938_607	681881	683632	-	Transketolase_N \| E1_dh \| TPP_enzyme_C \| Transket_pyr \| Transketolase_C \| DXP_synthase_N \| DXP_synthase_N
TC	A19_contig_3938	A19_contig_3938_608	683826	685823	+	1.I.1.1.3
NULL(UNKNOWN)	A19_contig_3938	A19_contig_3938_609	685884	686267	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	A19_contig_3938	A19_contig_3938_610	686400	687938	-	GH13_44
pfam	A19_contig_3938	A19_contig_3938_611	688123	688968	+	VanW
CAZyme	A19_contig_3938	A19_contig_3938_612	689212	691461	+	GH74
TC	A19_contig_3938	A19_contig_3938_613	691682	692287	-	9.B.31.1.1

Gene ID: A19_contig_3938_603
Type: TC
Location: 675831 - 676418 (-)

Gene ID: A19_contig_3938_604
Type: pfam
Location: 677115 - 678170 (+)

Gene ID: A19_contig_3938_605
Type: TC
Location: 678212 - 679930 (+)

Gene ID: A19_contig_3938_606
Type: TC
Location: 680008 - 681846 (+)

Gene ID: A19_contig_3938_607
Type: pfam
Location: 681881 - 683632 (-)

Gene ID: A19_contig_3938_608
Type: TC
Location: 683826 - 685823 (+)

Gene ID: A19_contig_3938_609
Type:
Location: 685884 - 686267 (-)

Gene ID: A19_contig_3938_610
Type: CAZyme
Location: 686400 - 687938 (-)

Gene ID: A19_contig_3938_611
Type: pfam
Location: 688123 - 688968 (+)

Gene ID: A19_contig_3938_612
Type: CAZyme
Location: 689212 - 691461 (+)

Gene ID: A19_contig_3938_613
Type: TC
Location: 691682 - 692287 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
A19_contig_3938_603	vegetarian > omnivore	2.60390	0.04492
A19_contig_3938_603	vegetarian > vegan	2.25889	0.02745

Gene ID	Condition Pair	log2FC	FDR P-value
A19_contig_3938_604	flexitarian > vegan	4.53338	0.03733