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Cluster: A171.CMAG_4_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A171_contig_4 A171_contig_4_482 588544 589716 + GT4
pfam A171_contig_4 A171_contig_4_483 589713 590723 + LPG_synthase_TM
pfam A171_contig_4 A171_contig_4_484 590727 591656 - Glycos_transf_2
TC A171_contig_4 A171_contig_4_485 591653 594136 - 3.A.9.1.2
CAZyme A171_contig_4 A171_contig_4_486 594162 595832 - GH13_38
pfam A171_contig_4 A171_contig_4_487 595959 596858 - Acyl_transf_1
pfam A171_contig_4 A171_contig_4_488 597109 598452 + ELFV_dehydrog | ELFV_dehydrog_N
TC A171_contig_4 A171_contig_4_489 598757 599485 + 9.B.186.1.3
Gene ID: A171_contig_4_482
Type: CAZyme
Location: 588544 - 589716 (+)
Gene ID: A171_contig_4_483
Type: pfam
Location: 589713 - 590723 (+)
Gene ID: A171_contig_4_484
Type: pfam
Location: 590727 - 591656 (-)
Gene ID: A171_contig_4_485
Type: TC
Location: 591653 - 594136 (-)
Gene ID: A171_contig_4_486
Type: CAZyme
Location: 594162 - 595832 (-)
Gene ID: A171_contig_4_487
Type: pfam
Location: 595959 - 596858 (-)
Gene ID: A171_contig_4_488
Type: pfam
Location: 597109 - 598452 (+)
Gene ID: A171_contig_4_489
Type: TC
Location: 598757 - 599485 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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