Cluster: A171.CMAG_4_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: A171.CMAG_4
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A171_contig_4 | A171_contig_4_2163 | 2537786 | 2541031 | + | 1.B.14.6.1 |
| pfam | A171_contig_4 | A171_contig_4_2164 | 2541055 | 2542587 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | A171_contig_4 | A171_contig_4_2165 | 2542584 | 2543063 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A171_contig_4 | A171_contig_4_2166 | 2543070 | 2545955 | - | GH84 |
Gene ID: A171_contig_4_2163
Type: TC
Location: 2537786 - 2541031 (+)
Type: TC
Location: 2537786 - 2541031 (+)
Gene ID: A171_contig_4_2164
Type: pfam
Location: 2541055 - 2542587 (+)
Type: pfam
Location: 2541055 - 2542587 (+)
Gene ID: A171_contig_4_2165
Type:
Location: 2542584 - 2543063 (-)
Type:
Location: 2542584 - 2543063 (-)
Gene ID: A171_contig_4_2166
Type: CAZyme
Location: 2543070 - 2545955 (-)
Type: CAZyme
Location: 2543070 - 2545955 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000438115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.