Cluster: A171.CMAG_4_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: A171.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A171_contig_4 | A171_contig_4_2155 | 2526583 | 2528334 | - | 3.A.18.1.1 |
| CAZyme | A171_contig_4 | A171_contig_4_2156 | 2528548 | 2530659 | + | CE20 |
| CAZyme | A171_contig_4 | A171_contig_4_2157 | 2530709 | 2531707 | + | GH29 |
| CAZyme | A171_contig_4 | A171_contig_4_2158 | 2531827 | 2533830 | + | GH20 |
| CAZyme | A171_contig_4 | A171_contig_4_2159 | 2533887 | 2534960 | + | GT2 |
Gene ID: A171_contig_4_2155
Type: TC
Location: 2526583 - 2528334 (-)
Type: TC
Location: 2526583 - 2528334 (-)
Gene ID: A171_contig_4_2156
Type: CAZyme
Location: 2528548 - 2530659 (+)
Type: CAZyme
Location: 2528548 - 2530659 (+)
Gene ID: A171_contig_4_2157
Type: CAZyme
Location: 2530709 - 2531707 (+)
Type: CAZyme
Location: 2530709 - 2531707 (+)
Gene ID: A171_contig_4_2158
Type: CAZyme
Location: 2531827 - 2533830 (+)
Type: CAZyme
Location: 2531827 - 2533830 (+)
Gene ID: A171_contig_4_2159
Type: CAZyme
Location: 2533887 - 2534960 (+)
Type: CAZyme
Location: 2533887 - 2534960 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000438115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.