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Cluster: A171.CMAG_4_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A171_contig_4 A171_contig_4_76 100698 101627 + 3.A.1.105.16
TC A171_contig_4 A171_contig_4_77 101602 103116 + 3.A.1.105.15
TC A171_contig_4 A171_contig_4_78 103163 104260 + 3.A.1.105.4
TC A171_contig_4 A171_contig_4_79 104275 105363 + 3.A.1.105.15
TC A171_contig_4 A171_contig_4_80 105431 106216 - 3.A.1.13.2
TC A171_contig_4 A171_contig_4_81 106230 107240 - 2.A.4.7.7
CAZyme A171_contig_4 A171_contig_4_82 107458 109416 + GH20
TC A171_contig_4 A171_contig_4_83 116621 118012 + 2.A.22.5.3
Gene ID: A171_contig_4_76
Type: TC
Location: 100698 - 101627 (+)
Gene ID: A171_contig_4_77
Type: TC
Location: 101602 - 103116 (+)
Gene ID: A171_contig_4_78
Type: TC
Location: 103163 - 104260 (+)
Gene ID: A171_contig_4_79
Type: TC
Location: 104275 - 105363 (+)
Gene ID: A171_contig_4_80
Type: TC
Location: 105431 - 106216 (-)
Gene ID: A171_contig_4_81
Type: TC
Location: 106230 - 107240 (-)
Gene ID: A171_contig_4_82
Type: CAZyme
Location: 107458 - 109416 (+)
Gene ID: A171_contig_4_83
Type: TC
Location: 116621 - 118012 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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