Cluster: A171.CMAG_4_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A171.CMAG_4
- CGC Family ID: CGCFAM_03068
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A171_contig_4 | A171_contig_4_1340 | 1555501 | 1557384 | + | 1.B.14.3.1 |
| pfam | A171_contig_4 | A171_contig_4_1341 | 1557407 | 1558372 | + | DUF362 |
| NULL(UNKNOWN) | A171_contig_4 | A171_contig_4_1342 | 1558718 | 1558957 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A171_contig_4 | A171_contig_4_1343 | 1559254 | 1560807 | - | 1.B.9.4.2 |
| NULL(UNKNOWN) | A171_contig_4 | A171_contig_4_1344 | 1560874 | 1561848 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A171_contig_4 | A171_contig_4_1345 | 1562367 | 1563293 | - | GH73 |
Gene ID: A171_contig_4_1340
Type: TC
Location: 1555501 - 1557384 (+)
Type: TC
Location: 1555501 - 1557384 (+)
Gene ID: A171_contig_4_1341
Type: pfam
Location: 1557407 - 1558372 (+)
Type: pfam
Location: 1557407 - 1558372 (+)
Gene ID: A171_contig_4_1342
Type:
Location: 1558718 - 1558957 (+)
Type:
Location: 1558718 - 1558957 (+)
Gene ID: A171_contig_4_1343
Type: TC
Location: 1559254 - 1560807 (-)
Type: TC
Location: 1559254 - 1560807 (-)
Gene ID: A171_contig_4_1344
Type:
Location: 1560874 - 1561848 (-)
Type:
Location: 1560874 - 1561848 (-)
Gene ID: A171_contig_4_1345
Type: CAZyme
Location: 1562367 - 1563293 (-)
Type: CAZyme
Location: 1562367 - 1563293 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000438115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A171_contig_4_1341 | vegetarian > vegan | 1.28840 | 0.02695 |