Cluster: A171.CMAG_4_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A171.CMAG_4
- CGC Family ID: CGCFAM_04344
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A171_contig_4 | A171_contig_4_1110 | 1279469 | 1281442 | + | 3.A.3.6.10 |
| STP | A171_contig_4 | A171_contig_4_1111 | 1281464 | 1282276 | - | Fer4 | Fer4 |
| NULL(UNKNOWN) | A171_contig_4 | A171_contig_4_1112 | 1282421 | 1282546 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A171_contig_4 | A171_contig_4_1113 | 1282567 | 1286625 | + | GH20 |
| CAZyme | A171_contig_4 | A171_contig_4_1114 | 1286885 | 1288570 | + | GH20 |
Gene ID: A171_contig_4_1110
Type: TC
Location: 1279469 - 1281442 (+)
Type: TC
Location: 1279469 - 1281442 (+)
Gene ID: A171_contig_4_1111
Type: STP
Location: 1281464 - 1282276 (-)
Type: STP
Location: 1281464 - 1282276 (-)
Gene ID: A171_contig_4_1112
Type:
Location: 1282421 - 1282546 (-)
Type:
Location: 1282421 - 1282546 (-)
Gene ID: A171_contig_4_1113
Type: CAZyme
Location: 1282567 - 1286625 (+)
Type: CAZyme
Location: 1282567 - 1286625 (+)
Gene ID: A171_contig_4_1114
Type: CAZyme
Location: 1286885 - 1288570 (+)
Type: CAZyme
Location: 1286885 - 1288570 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000438115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.