Cluster: A165.bin_10_CGC49
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate: beta-glucan
- Genome ID: A165.bin_10
- CGC Family ID: CGCFAM_00213
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A165_contig_119 | A165_contig_119_1460 | 1816761 | 1817459 | + | 3.A.1.132.1 |
| pfam | A165_contig_119 | A165_contig_119_1461 | 1817456 | 1818490 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| TF | A165_contig_119 | A165_contig_119_1462 | 1818564 | 1819436 | + | HTH_AraC |
| CAZyme | A165_contig_119 | A165_contig_119_1463 | 1819573 | 1825128 | - | CBM32 | CBM32 | CBM32 | GH81 |
| CAZyme | A165_contig_119 | A165_contig_119_1464 | 1825164 | 1829489 | - | CBM32 | CBM32 | CBM32 | GH3 |
| CAZyme | A165_contig_119 | A165_contig_119_1465 | 1829906 | 1832143 | - | GH3 |
| NULL(UNKNOWN) | A165_contig_119 | A165_contig_119_1466 | 1832187 | 1832339 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A165_contig_119 | A165_contig_119_1467 | 1832345 | 1834513 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A165_contig_119 | A165_contig_119_1468 | 1834510 | 1835196 | - | CBM32 |
| CAZyme | A165_contig_119 | A165_contig_119_1469 | 1835222 | 1836742 | - | GH128 |
| CAZyme | A165_contig_119 | A165_contig_119_1470 | 1836754 | 1838289 | - | CBM6 | GH128 |
| CAZyme | A165_contig_119 | A165_contig_119_1471 | 1838304 | 1839479 | - | GH16_3 |
| NULL(UNKNOWN) | A165_contig_119 | A165_contig_119_1472 | 1839637 | 1840506 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A165_contig_119 | A165_contig_119_1473 | 1840555 | 1842165 | - | 8.A.46.1.3 |
| TC | A165_contig_119 | A165_contig_119_1474 | 1842186 | 1845311 | - | 1.B.14.6.1 |
Gene ID: A165_contig_119_1460
Type: TC
Location: 1816761 - 1817459 (+)
Type: TC
Location: 1816761 - 1817459 (+)
Gene ID: A165_contig_119_1461
Type: pfam
Location: 1817456 - 1818490 (+)
Type: pfam
Location: 1817456 - 1818490 (+)
Gene ID: A165_contig_119_1462
Type: TF
Location: 1818564 - 1819436 (+)
Type: TF
Location: 1818564 - 1819436 (+)
Gene ID: A165_contig_119_1463
Type: CAZyme
Location: 1819573 - 1825128 (-)
Type: CAZyme
Location: 1819573 - 1825128 (-)
Gene ID: A165_contig_119_1464
Type: CAZyme
Location: 1825164 - 1829489 (-)
Type: CAZyme
Location: 1825164 - 1829489 (-)
Gene ID: A165_contig_119_1465
Type: CAZyme
Location: 1829906 - 1832143 (-)
Type: CAZyme
Location: 1829906 - 1832143 (-)
Gene ID: A165_contig_119_1466
Type:
Location: 1832187 - 1832339 (-)
Type:
Location: 1832187 - 1832339 (-)
Gene ID: A165_contig_119_1467
Type:
Location: 1832345 - 1834513 (-)
Type:
Location: 1832345 - 1834513 (-)
Gene ID: A165_contig_119_1468
Type: CAZyme
Location: 1834510 - 1835196 (-)
Type: CAZyme
Location: 1834510 - 1835196 (-)
Gene ID: A165_contig_119_1469
Type: CAZyme
Location: 1835222 - 1836742 (-)
Type: CAZyme
Location: 1835222 - 1836742 (-)
Gene ID: A165_contig_119_1470
Type: CAZyme
Location: 1836754 - 1838289 (-)
Type: CAZyme
Location: 1836754 - 1838289 (-)
Gene ID: A165_contig_119_1471
Type: CAZyme
Location: 1838304 - 1839479 (-)
Type: CAZyme
Location: 1838304 - 1839479 (-)
Gene ID: A165_contig_119_1472
Type:
Location: 1839637 - 1840506 (-)
Type:
Location: 1839637 - 1840506 (-)
Gene ID: A165_contig_119_1473
Type: TC
Location: 1840555 - 1842165 (-)
Type: TC
Location: 1840555 - 1842165 (-)
Gene ID: A165_contig_119_1474
Type: TC
Location: 1842186 - 1845311 (-)
Type: TC
Location: 1842186 - 1845311 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
OM05-12
Species
OM05-12 sp003438995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.