Cluster: A165.bin_10_CGC41
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: A165.bin_10
- CGC Family ID: CGCFAM_00170
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A165_contig_119 | A165_contig_119_801 | 1062312 | 1063133 | + | GT5 |
| pfam | A165_contig_119 | A165_contig_119_802 | 1063153 | 1064610 | + | DUF4270 |
| CAZyme | A165_contig_119 | A165_contig_119_803 | 1064677 | 1066077 | - | GH57 |
| CAZyme | A165_contig_119 | A165_contig_119_804 | 1066096 | 1067364 | - | GT4 |
| CAZyme | A165_contig_119 | A165_contig_119_805 | 1067380 | 1069320 | - | GH133 |
| TC | A165_contig_119 | A165_contig_119_806 | 1069489 | 1070160 | + | 9.B.104.3.2 |
| CAZyme | A165_contig_119 | A165_contig_119_807 | 1070649 | 1072421 | - | GH87 |
| pfam | A165_contig_119 | A165_contig_119_808 | 1072594 | 1074390 | - | SusD_RagB | SusD-like_3 |
| TC | A165_contig_119 | A165_contig_119_809 | 1074420 | 1077512 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | A165_contig_119 | A165_contig_119_810 | 1077662 | 1078480 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A165_contig_119 | A165_contig_119_811 | 1078895 | 1080892 | + | GH87 |
| pfam | A165_contig_119 | A165_contig_119_812 | 1080970 | 1082610 | + | DUF6377 |
| CAZyme | A165_contig_119 | A165_contig_119_813 | 1082834 | 1084852 | + | GH97 |
Gene ID: A165_contig_119_801
Type: CAZyme
Location: 1062312 - 1063133 (+)
Type: CAZyme
Location: 1062312 - 1063133 (+)
Gene ID: A165_contig_119_802
Type: pfam
Location: 1063153 - 1064610 (+)
Type: pfam
Location: 1063153 - 1064610 (+)
Gene ID: A165_contig_119_803
Type: CAZyme
Location: 1064677 - 1066077 (-)
Type: CAZyme
Location: 1064677 - 1066077 (-)
Gene ID: A165_contig_119_804
Type: CAZyme
Location: 1066096 - 1067364 (-)
Type: CAZyme
Location: 1066096 - 1067364 (-)
Gene ID: A165_contig_119_805
Type: CAZyme
Location: 1067380 - 1069320 (-)
Type: CAZyme
Location: 1067380 - 1069320 (-)
Gene ID: A165_contig_119_806
Type: TC
Location: 1069489 - 1070160 (+)
Type: TC
Location: 1069489 - 1070160 (+)
Gene ID: A165_contig_119_807
Type: CAZyme
Location: 1070649 - 1072421 (-)
Type: CAZyme
Location: 1070649 - 1072421 (-)
Gene ID: A165_contig_119_808
Type: pfam
Location: 1072594 - 1074390 (-)
Type: pfam
Location: 1072594 - 1074390 (-)
Gene ID: A165_contig_119_809
Type: TC
Location: 1074420 - 1077512 (-)
Type: TC
Location: 1074420 - 1077512 (-)
Gene ID: A165_contig_119_810
Type:
Location: 1077662 - 1078480 (-)
Type:
Location: 1077662 - 1078480 (-)
Gene ID: A165_contig_119_811
Type: CAZyme
Location: 1078895 - 1080892 (+)
Type: CAZyme
Location: 1078895 - 1080892 (+)
Gene ID: A165_contig_119_812
Type: pfam
Location: 1080970 - 1082610 (+)
Type: pfam
Location: 1080970 - 1082610 (+)
Gene ID: A165_contig_119_813
Type: CAZyme
Location: 1082834 - 1084852 (+)
Type: CAZyme
Location: 1082834 - 1084852 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
OM05-12
Species
OM05-12 sp003438995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.