Cluster: A165.bin_10_CGC40
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate: pectin/host glycan
- Genome ID: A165.bin_10
- CGC Family ID: CGCFAM_00110
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A165_contig_119 | A165_contig_119_696 | 970510 | 972390 | - | CBM32 | GH29 |
| CAZyme | A165_contig_119 | A165_contig_119_697 | 972459 | 975503 | - | GH2 |
| sulfatase | A165_contig_119 | A165_contig_119_698 | 975581 | 977119 | - | S1_15 |
| CAZyme | A165_contig_119 | A165_contig_119_699 | 977133 | 979463 | - | GH20 |
| sulfatase | A165_contig_119 | A165_contig_119_700 | 979473 | 981041 | - | S1_11 |
| pfam | A165_contig_119 | A165_contig_119_701 | 981228 | 983123 | - | SusD_RagB | SusD-like_3 |
| TC | A165_contig_119 | A165_contig_119_702 | 983141 | 986347 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | A165_contig_119 | A165_contig_119_703 | 986374 | 986958 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A165_contig_119 | A165_contig_119_704 | 986971 | 989493 | - | GH18 |
Gene ID: A165_contig_119_696
Type: CAZyme
Location: 970510 - 972390 (-)
Type: CAZyme
Location: 970510 - 972390 (-)
Gene ID: A165_contig_119_697
Type: CAZyme
Location: 972459 - 975503 (-)
Type: CAZyme
Location: 972459 - 975503 (-)
Gene ID: A165_contig_119_698
Type: sulfatase
Location: 975581 - 977119 (-)
Type: sulfatase
Location: 975581 - 977119 (-)
Gene ID: A165_contig_119_699
Type: CAZyme
Location: 977133 - 979463 (-)
Type: CAZyme
Location: 977133 - 979463 (-)
Gene ID: A165_contig_119_700
Type: sulfatase
Location: 979473 - 981041 (-)
Type: sulfatase
Location: 979473 - 981041 (-)
Gene ID: A165_contig_119_701
Type: pfam
Location: 981228 - 983123 (-)
Type: pfam
Location: 981228 - 983123 (-)
Gene ID: A165_contig_119_702
Type: TC
Location: 983141 - 986347 (-)
Type: TC
Location: 983141 - 986347 (-)
Gene ID: A165_contig_119_703
Type:
Location: 986374 - 986958 (-)
Type:
Location: 986374 - 986958 (-)
Gene ID: A165_contig_119_704
Type: CAZyme
Location: 986971 - 989493 (-)
Type: CAZyme
Location: 986971 - 989493 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
OM05-12
Species
OM05-12 sp003438995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.