Cluster: A165.bin_10_CGC38
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate: fructan
- Genome ID: A165.bin_10
- CGC Family ID: CGCFAM_00017
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A165_contig_119 | A165_contig_119_593 | 825430 | 827262 | + | 3.A.1.106.1 |
| pfam | A165_contig_119 | A165_contig_119_594 | 827350 | 828843 | - | GHL10 |
| pfam | A165_contig_119 | A165_contig_119_595 | 828963 | 831770 | + | UvrA_DNA-bind | UvrA_inter |
| CAZyme | A165_contig_119 | A165_contig_119_596 | 831823 | 833898 | - | GH172 |
| NULL(UNKNOWN) | A165_contig_119 | A165_contig_119_597 | 833958 | 835208 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A165_contig_119 | A165_contig_119_598 | 835240 | 836787 | - | GH32 |
| pfam | A165_contig_119 | A165_contig_119_599 | 836859 | 838247 | - | DUF4960 |
| pfam | A165_contig_119 | A165_contig_119_600 | 838266 | 839972 | - | SusD_RagB | SusD-like_3 |
| TC | A165_contig_119 | A165_contig_119_601 | 840004 | 843132 | - | 1.B.14.6.1 |
| CAZyme | A165_contig_119 | A165_contig_119_602 | 843371 | 845170 | + | GH32 |
| TC | A165_contig_119 | A165_contig_119_603 | 845188 | 846354 | + | 2.A.1.7.17 |
| STP | A165_contig_119 | A165_contig_119_604 | 846366 | 847253 | + | PfkB |
| TF | A165_contig_119 | A165_contig_119_605 | 847411 | 850173 | + | HTH_AraC |
| TC | A165_contig_119 | A165_contig_119_606 | 850200 | 852236 | - | 2.A.21.9.2 |
Gene ID: A165_contig_119_593
Type: TC
Location: 825430 - 827262 (+)
Type: TC
Location: 825430 - 827262 (+)
Gene ID: A165_contig_119_594
Type: pfam
Location: 827350 - 828843 (-)
Type: pfam
Location: 827350 - 828843 (-)
Gene ID: A165_contig_119_595
Type: pfam
Location: 828963 - 831770 (+)
Type: pfam
Location: 828963 - 831770 (+)
Gene ID: A165_contig_119_596
Type: CAZyme
Location: 831823 - 833898 (-)
Type: CAZyme
Location: 831823 - 833898 (-)
Gene ID: A165_contig_119_597
Type:
Location: 833958 - 835208 (-)
Type:
Location: 833958 - 835208 (-)
Gene ID: A165_contig_119_598
Type: CAZyme
Location: 835240 - 836787 (-)
Type: CAZyme
Location: 835240 - 836787 (-)
Gene ID: A165_contig_119_599
Type: pfam
Location: 836859 - 838247 (-)
Type: pfam
Location: 836859 - 838247 (-)
Gene ID: A165_contig_119_600
Type: pfam
Location: 838266 - 839972 (-)
Type: pfam
Location: 838266 - 839972 (-)
Gene ID: A165_contig_119_601
Type: TC
Location: 840004 - 843132 (-)
Type: TC
Location: 840004 - 843132 (-)
Gene ID: A165_contig_119_602
Type: CAZyme
Location: 843371 - 845170 (+)
Type: CAZyme
Location: 843371 - 845170 (+)
Gene ID: A165_contig_119_603
Type: TC
Location: 845188 - 846354 (+)
Type: TC
Location: 845188 - 846354 (+)
Gene ID: A165_contig_119_604
Type: STP
Location: 846366 - 847253 (+)
Type: STP
Location: 846366 - 847253 (+)
Gene ID: A165_contig_119_605
Type: TF
Location: 847411 - 850173 (+)
Type: TF
Location: 847411 - 850173 (+)
Gene ID: A165_contig_119_606
Type: TC
Location: 850200 - 852236 (-)
Type: TC
Location: 850200 - 852236 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
OM05-12
Species
OM05-12 sp003438995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.