Cluster: A165.bin_10_CGC3
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 8
- Substrate:
- Genome ID: A165.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A165_contig_4255 | A165_contig_4255_258 | 303579 | 304325 | + | 3.A.1.122.2 |
| TC | A165_contig_4255 | A165_contig_4255_259 | 304340 | 305560 | + | 3.A.1.122.1 |
| pfam | A165_contig_4255 | A165_contig_4255_260 | 305598 | 306740 | + | His_kinase |
| TF | A165_contig_4255 | A165_contig_4255_261 | 306737 | 307483 | + | LytTR |
| CAZyme | A165_contig_4255 | A165_contig_4255_262 | 307614 | 311129 | + | CBM67 | GH78 |
| STP | A165_contig_4255 | A165_contig_4255_263 | 311145 | 314294 | - | HATPase_c | HisKA | Response_reg |
| CAZyme | A165_contig_4255 | A165_contig_4255_264 | 314524 | 316275 | + | GH123 |
| CAZyme | A165_contig_4255 | A165_contig_4255_265 | 316281 | 317000 | - | GT26 |
| CAZyme | A165_contig_4255 | A165_contig_4255_266 | 317569 | 318144 | - | GT4 |
| NULL(UNKNOWN) | A165_contig_4255 | A165_contig_4255_267 | 318152 | 318664 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A165_contig_4255 | A165_contig_4255_268 | 318703 | 319506 | - | GT2 |
| NULL(UNKNOWN) | A165_contig_4255 | A165_contig_4255_269 | 319558 | 320703 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A165_contig_4255 | A165_contig_4255_270 | 320700 | 321659 | - | GT32 |
| CAZyme | A165_contig_4255 | A165_contig_4255_271 | 321652 | 322563 | - | GT2 |
| NULL(UNKNOWN) | A165_contig_4255 | A165_contig_4255_272 | 322567 | 323796 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A165_contig_4255 | A165_contig_4255_273 | 323834 | 324571 | - | Hexapep | Hexapep_2 |
| CAZyme | A165_contig_4255 | A165_contig_4255_274 | 324584 | 325498 | - | GT8 |
Gene ID: A165_contig_4255_258
Type: TC
Location: 303579 - 304325 (+)
Type: TC
Location: 303579 - 304325 (+)
Gene ID: A165_contig_4255_259
Type: TC
Location: 304340 - 305560 (+)
Type: TC
Location: 304340 - 305560 (+)
Gene ID: A165_contig_4255_260
Type: pfam
Location: 305598 - 306740 (+)
Type: pfam
Location: 305598 - 306740 (+)
Gene ID: A165_contig_4255_261
Type: TF
Location: 306737 - 307483 (+)
Type: TF
Location: 306737 - 307483 (+)
Gene ID: A165_contig_4255_262
Type: CAZyme
Location: 307614 - 311129 (+)
Type: CAZyme
Location: 307614 - 311129 (+)
Gene ID: A165_contig_4255_263
Type: STP
Location: 311145 - 314294 (-)
Type: STP
Location: 311145 - 314294 (-)
Gene ID: A165_contig_4255_264
Type: CAZyme
Location: 314524 - 316275 (+)
Type: CAZyme
Location: 314524 - 316275 (+)
Gene ID: A165_contig_4255_265
Type: CAZyme
Location: 316281 - 317000 (-)
Type: CAZyme
Location: 316281 - 317000 (-)
Gene ID: A165_contig_4255_266
Type: CAZyme
Location: 317569 - 318144 (-)
Type: CAZyme
Location: 317569 - 318144 (-)
Gene ID: A165_contig_4255_267
Type:
Location: 318152 - 318664 (-)
Type:
Location: 318152 - 318664 (-)
Gene ID: A165_contig_4255_268
Type: CAZyme
Location: 318703 - 319506 (-)
Type: CAZyme
Location: 318703 - 319506 (-)
Gene ID: A165_contig_4255_269
Type:
Location: 319558 - 320703 (-)
Type:
Location: 319558 - 320703 (-)
Gene ID: A165_contig_4255_270
Type: CAZyme
Location: 320700 - 321659 (-)
Type: CAZyme
Location: 320700 - 321659 (-)
Gene ID: A165_contig_4255_271
Type: CAZyme
Location: 321652 - 322563 (-)
Type: CAZyme
Location: 321652 - 322563 (-)
Gene ID: A165_contig_4255_272
Type:
Location: 322567 - 323796 (-)
Type:
Location: 322567 - 323796 (-)
Gene ID: A165_contig_4255_273
Type: pfam
Location: 323834 - 324571 (-)
Type: pfam
Location: 323834 - 324571 (-)
Gene ID: A165_contig_4255_274
Type: CAZyme
Location: 324584 - 325498 (-)
Type: CAZyme
Location: 324584 - 325498 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
OM05-12
Species
OM05-12 sp003438995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.