Cluster: A165.bin_10_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: A165.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A165_contig_4255 | A165_contig_4255_786 | 988263 | 989393 | + | 1.B.3.1.6 |
| TC | A165_contig_4255 | A165_contig_4255_787 | 989396 | 990037 | + | 3.A.1.12.4 |
| TC | A165_contig_4255 | A165_contig_4255_788 | 990040 | 990939 | + | 3.A.1.12.3 |
| TC | A165_contig_4255 | A165_contig_4255_789 | 990936 | 991670 | + | 3.A.1.12.4 |
| pfam | A165_contig_4255 | A165_contig_4255_790 | 991842 | 992018 | + | Hc1 |
| CAZyme | A165_contig_4255 | A165_contig_4255_791 | 992087 | 994429 | - | GH20 |
| pfam | A165_contig_4255 | A165_contig_4255_792 | 994502 | 996415 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | A165_contig_4255 | A165_contig_4255_793 | 996428 | 999715 | - | 1.B.14.6.1 |
| pfam | A165_contig_4255 | A165_contig_4255_794 | 999727 | 1002306 | - | Laminin_G_3 | Por_Secre_tail |
| NULL(UNKNOWN) | A165_contig_4255 | A165_contig_4255_795 | 1002400 | 1003488 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A165_contig_4255 | A165_contig_4255_796 | 1003740 | 1004855 | + | GH18 |
Gene ID: A165_contig_4255_786
Type: TC
Location: 988263 - 989393 (+)
Type: TC
Location: 988263 - 989393 (+)
Gene ID: A165_contig_4255_787
Type: TC
Location: 989396 - 990037 (+)
Type: TC
Location: 989396 - 990037 (+)
Gene ID: A165_contig_4255_788
Type: TC
Location: 990040 - 990939 (+)
Type: TC
Location: 990040 - 990939 (+)
Gene ID: A165_contig_4255_789
Type: TC
Location: 990936 - 991670 (+)
Type: TC
Location: 990936 - 991670 (+)
Gene ID: A165_contig_4255_790
Type: pfam
Location: 991842 - 992018 (+)
Type: pfam
Location: 991842 - 992018 (+)
Gene ID: A165_contig_4255_791
Type: CAZyme
Location: 992087 - 994429 (-)
Type: CAZyme
Location: 992087 - 994429 (-)
Gene ID: A165_contig_4255_792
Type: pfam
Location: 994502 - 996415 (-)
Type: pfam
Location: 994502 - 996415 (-)
Gene ID: A165_contig_4255_793
Type: TC
Location: 996428 - 999715 (-)
Type: TC
Location: 996428 - 999715 (-)
Gene ID: A165_contig_4255_794
Type: pfam
Location: 999727 - 1002306 (-)
Type: pfam
Location: 999727 - 1002306 (-)
Gene ID: A165_contig_4255_795
Type:
Location: 1002400 - 1003488 (-)
Type:
Location: 1002400 - 1003488 (-)
Gene ID: A165_contig_4255_796
Type: CAZyme
Location: 1003740 - 1004855 (+)
Type: CAZyme
Location: 1003740 - 1004855 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
OM05-12
Species
OM05-12 sp003438995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.