Cluster: A165.bin_10_CGC12
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: A165.bin_10
- CGC Family ID: CGCFAM_01268
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A165_contig_4255 | A165_contig_4255_640 | 784113 | 786311 | + | GH92 |
| TF | A165_contig_4255 | A165_contig_4255_641 | 786425 | 786982 | + | GerE |
| STP | A165_contig_4255 | A165_contig_4255_642 | 787012 | 788025 | + | FecR |
| CAZyme | A165_contig_4255 | A165_contig_4255_643 | 788046 | 790325 | + | GH92 |
| CAZyme | A165_contig_4255 | A165_contig_4255_644 | 790336 | 792609 | + | GH92 |
| TC | A165_contig_4255 | A165_contig_4255_645 | 792939 | 796316 | + | 1.B.14.6.2 |
| TC | A165_contig_4255 | A165_contig_4255_646 | 796337 | 798058 | + | 8.A.46.2.1 |
| pfam | A165_contig_4255 | A165_contig_4255_647 | 798142 | 798999 | + | Exo_endo_phos |
| CAZyme | A165_contig_4255 | A165_contig_4255_648 | 799147 | 801033 | + | GH97 |
| pfam | A165_contig_4255 | A165_contig_4255_649 | 801163 | 802449 | + | MFS_1 | MFS_1 |
| CAZyme | A165_contig_4255 | A165_contig_4255_650 | 802477 | 803475 | + | GH130_2 |
Gene ID: A165_contig_4255_640
Type: CAZyme
Location: 784113 - 786311 (+)
Type: CAZyme
Location: 784113 - 786311 (+)
Gene ID: A165_contig_4255_641
Type: TF
Location: 786425 - 786982 (+)
Type: TF
Location: 786425 - 786982 (+)
Gene ID: A165_contig_4255_642
Type: STP
Location: 787012 - 788025 (+)
Type: STP
Location: 787012 - 788025 (+)
Gene ID: A165_contig_4255_643
Type: CAZyme
Location: 788046 - 790325 (+)
Type: CAZyme
Location: 788046 - 790325 (+)
Gene ID: A165_contig_4255_644
Type: CAZyme
Location: 790336 - 792609 (+)
Type: CAZyme
Location: 790336 - 792609 (+)
Gene ID: A165_contig_4255_645
Type: TC
Location: 792939 - 796316 (+)
Type: TC
Location: 792939 - 796316 (+)
Gene ID: A165_contig_4255_646
Type: TC
Location: 796337 - 798058 (+)
Type: TC
Location: 796337 - 798058 (+)
Gene ID: A165_contig_4255_647
Type: pfam
Location: 798142 - 798999 (+)
Type: pfam
Location: 798142 - 798999 (+)
Gene ID: A165_contig_4255_648
Type: CAZyme
Location: 799147 - 801033 (+)
Type: CAZyme
Location: 799147 - 801033 (+)
Gene ID: A165_contig_4255_649
Type: pfam
Location: 801163 - 802449 (+)
Type: pfam
Location: 801163 - 802449 (+)
Gene ID: A165_contig_4255_650
Type: CAZyme
Location: 802477 - 803475 (+)
Type: CAZyme
Location: 802477 - 803475 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
OM05-12
Species
OM05-12 sp003438995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.