Cluster: A152.bin_3_CGC84
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: A152.bin_3
- CGC Family ID: CGCFAM_06659
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A152_contig_1379 | A152_contig_1379_4268 | 5048279 | 5049754 | + | 1.B.73.2.2 |
| pfam | A152_contig_1379 | A152_contig_1379_4269 | 5049751 | 5050134 | + | Lipocalin_8 |
| pfam | A152_contig_1379 | A152_contig_1379_4270 | 5050275 | 5051105 | + | DUF3805 | DUF3806 |
| TC | A152_contig_1379 | A152_contig_1379_4271 | 5051131 | 5052996 | + | 3.A.1.120.6 |
| pfam | A152_contig_1379 | A152_contig_1379_4272 | 5052993 | 5053826 | + | PHP |
| CAZyme | A152_contig_1379 | A152_contig_1379_4273 | 5053838 | 5054662 | + | GH16_3 |
| CAZyme | A152_contig_1379 | A152_contig_1379_4274 | 5054678 | 5056717 | - | PL30 | PL8 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_4275 | 5056895 | 5058130 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | A152_contig_1379 | A152_contig_1379_4276 | 5058300 | 5059499 | + | Aminotran_1_2 |
| TC | A152_contig_1379 | A152_contig_1379_4277 | 5059506 | 5060813 | + | 3.A.1.125.1 |
| CAZyme | A152_contig_1379 | A152_contig_1379_4278 | 5060819 | 5061991 | - | GT2 |
Gene ID: A152_contig_1379_4268
Type: TC
Location: 5048279 - 5049754 (+)
Type: TC
Location: 5048279 - 5049754 (+)
Gene ID: A152_contig_1379_4269
Type: pfam
Location: 5049751 - 5050134 (+)
Type: pfam
Location: 5049751 - 5050134 (+)
Gene ID: A152_contig_1379_4270
Type: pfam
Location: 5050275 - 5051105 (+)
Type: pfam
Location: 5050275 - 5051105 (+)
Gene ID: A152_contig_1379_4271
Type: TC
Location: 5051131 - 5052996 (+)
Type: TC
Location: 5051131 - 5052996 (+)
Gene ID: A152_contig_1379_4272
Type: pfam
Location: 5052993 - 5053826 (+)
Type: pfam
Location: 5052993 - 5053826 (+)
Gene ID: A152_contig_1379_4273
Type: CAZyme
Location: 5053838 - 5054662 (+)
Type: CAZyme
Location: 5053838 - 5054662 (+)
Gene ID: A152_contig_1379_4274
Type: CAZyme
Location: 5054678 - 5056717 (-)
Type: CAZyme
Location: 5054678 - 5056717 (-)
Gene ID: A152_contig_1379_4275
Type:
Location: 5056895 - 5058130 (-)
Type:
Location: 5056895 - 5058130 (-)
Gene ID: A152_contig_1379_4276
Type: STP
Location: 5058300 - 5059499 (+)
Type: STP
Location: 5058300 - 5059499 (+)
Gene ID: A152_contig_1379_4277
Type: TC
Location: 5059506 - 5060813 (+)
Type: TC
Location: 5059506 - 5060813 (+)
Gene ID: A152_contig_1379_4278
Type: CAZyme
Location: 5060819 - 5061991 (-)
Type: CAZyme
Location: 5060819 - 5061991 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.