Cluster: A152.bin_3_CGC61
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: A152.bin_3
- CGC Family ID: CGCFAM_00363
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A152_contig_1379 | A152_contig_1379_3557 | 4157706 | 4159439 | - | 8.A.46.2.1 |
| TC | A152_contig_1379 | A152_contig_1379_3558 | 4159461 | 4162877 | - | 1.B.14.6.2 |
| CAZyme | A152_contig_1379 | A152_contig_1379_3559 | 4163208 | 4165478 | - | GH92 |
| CAZyme | A152_contig_1379 | A152_contig_1379_3560 | 4165815 | 4168082 | - | GH92 |
| STP | A152_contig_1379 | A152_contig_1379_3561 | 4168112 | 4169110 | - | FecR |
| TF | A152_contig_1379 | A152_contig_1379_3562 | 4169163 | 4169717 | - | GerE |
| CAZyme | A152_contig_1379 | A152_contig_1379_3563 | 4169733 | 4171934 | - | GH92 |
| TC | A152_contig_1379 | A152_contig_1379_3564 | 4172436 | 4173629 | - | 2.A.1.2.97 |
| TF | A152_contig_1379 | A152_contig_1379_3565 | 4173779 | 4174633 | + | HTH_AraC |
| pfam | A152_contig_1379 | A152_contig_1379_3566 | 4174881 | 4177499 | - | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| TC | A152_contig_1379 | A152_contig_1379_3567 | 4177603 | 4178571 | + | 1.A.34.1.3 |
| TF | A152_contig_1379 | A152_contig_1379_3568 | 4178585 | 4178950 | + | MerR |
| STP | A152_contig_1379 | A152_contig_1379_3569 | 4178999 | 4181245 | - | HD |
| CAZyme | A152_contig_1379 | A152_contig_1379_3570 | 4181314 | 4182633 | - | GH23 |
Gene ID: A152_contig_1379_3557
Type: TC
Location: 4157706 - 4159439 (-)
Type: TC
Location: 4157706 - 4159439 (-)
Gene ID: A152_contig_1379_3558
Type: TC
Location: 4159461 - 4162877 (-)
Type: TC
Location: 4159461 - 4162877 (-)
Gene ID: A152_contig_1379_3559
Type: CAZyme
Location: 4163208 - 4165478 (-)
Type: CAZyme
Location: 4163208 - 4165478 (-)
Gene ID: A152_contig_1379_3560
Type: CAZyme
Location: 4165815 - 4168082 (-)
Type: CAZyme
Location: 4165815 - 4168082 (-)
Gene ID: A152_contig_1379_3561
Type: STP
Location: 4168112 - 4169110 (-)
Type: STP
Location: 4168112 - 4169110 (-)
Gene ID: A152_contig_1379_3562
Type: TF
Location: 4169163 - 4169717 (-)
Type: TF
Location: 4169163 - 4169717 (-)
Gene ID: A152_contig_1379_3563
Type: CAZyme
Location: 4169733 - 4171934 (-)
Type: CAZyme
Location: 4169733 - 4171934 (-)
Gene ID: A152_contig_1379_3564
Type: TC
Location: 4172436 - 4173629 (-)
Type: TC
Location: 4172436 - 4173629 (-)
Gene ID: A152_contig_1379_3565
Type: TF
Location: 4173779 - 4174633 (+)
Type: TF
Location: 4173779 - 4174633 (+)
Gene ID: A152_contig_1379_3566
Type: pfam
Location: 4174881 - 4177499 (-)
Type: pfam
Location: 4174881 - 4177499 (-)
Gene ID: A152_contig_1379_3567
Type: TC
Location: 4177603 - 4178571 (+)
Type: TC
Location: 4177603 - 4178571 (+)
Gene ID: A152_contig_1379_3568
Type: TF
Location: 4178585 - 4178950 (+)
Type: TF
Location: 4178585 - 4178950 (+)
Gene ID: A152_contig_1379_3569
Type: STP
Location: 4178999 - 4181245 (-)
Type: STP
Location: 4178999 - 4181245 (-)
Gene ID: A152_contig_1379_3570
Type: CAZyme
Location: 4181314 - 4182633 (-)
Type: CAZyme
Location: 4181314 - 4182633 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.