Cluster: A152.bin_3_CGC58
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: A152.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A152_contig_1379 | A152_contig_1379_3302 | 3864406 | 3866112 | + | 3.A.3.7.2 |
| TC | A152_contig_1379 | A152_contig_1379_3303 | 3866158 | 3868182 | + | 3.A.3.7.2 |
| TC | A152_contig_1379 | A152_contig_1379_3304 | 3868194 | 3868775 | + | 3.A.3.7.2 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_3305 | 3868778 | 3869527 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A152_contig_1379 | A152_contig_1379_3306 | 3869622 | 3870749 | + | KdpD |
| TC | A152_contig_1379 | A152_contig_1379_3307 | 3870776 | 3872215 | + | 2.A.21.9.1 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_3308 | 3872577 | 3874970 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A152_contig_1379 | A152_contig_1379_3309 | 3875145 | 3878093 | + | GH115 |
| pfam | A152_contig_1379 | A152_contig_1379_3310 | 3878198 | 3878953 | + | NigD_N | NigD_C |
| pfam | A152_contig_1379 | A152_contig_1379_3311 | 3879923 | 3880309 | + | START_2 |
| TC | A152_contig_1379 | A152_contig_1379_3312 | 3880386 | 3882290 | + | 1.B.42.1.13 |
Gene ID: A152_contig_1379_3302
Type: TC
Location: 3864406 - 3866112 (+)
Type: TC
Location: 3864406 - 3866112 (+)
Gene ID: A152_contig_1379_3303
Type: TC
Location: 3866158 - 3868182 (+)
Type: TC
Location: 3866158 - 3868182 (+)
Gene ID: A152_contig_1379_3304
Type: TC
Location: 3868194 - 3868775 (+)
Type: TC
Location: 3868194 - 3868775 (+)
Gene ID: A152_contig_1379_3305
Type:
Location: 3868778 - 3869527 (+)
Type:
Location: 3868778 - 3869527 (+)
Gene ID: A152_contig_1379_3306
Type: pfam
Location: 3869622 - 3870749 (+)
Type: pfam
Location: 3869622 - 3870749 (+)
Gene ID: A152_contig_1379_3307
Type: TC
Location: 3870776 - 3872215 (+)
Type: TC
Location: 3870776 - 3872215 (+)
Gene ID: A152_contig_1379_3308
Type:
Location: 3872577 - 3874970 (+)
Type:
Location: 3872577 - 3874970 (+)
Gene ID: A152_contig_1379_3309
Type: CAZyme
Location: 3875145 - 3878093 (+)
Type: CAZyme
Location: 3875145 - 3878093 (+)
Gene ID: A152_contig_1379_3310
Type: pfam
Location: 3878198 - 3878953 (+)
Type: pfam
Location: 3878198 - 3878953 (+)
Gene ID: A152_contig_1379_3311
Type: pfam
Location: 3879923 - 3880309 (+)
Type: pfam
Location: 3879923 - 3880309 (+)
Gene ID: A152_contig_1379_3312
Type: TC
Location: 3880386 - 3882290 (+)
Type: TC
Location: 3880386 - 3882290 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A152_contig_1379_3307 | vegan > omnivore | 1.05470 | 0.01195 |