Cluster: A152.bin_3_CGC54
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 3
- Substrate:
- Genome ID: A152.bin_3
- CGC Family ID: CGCFAM_01107
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A152_contig_1379 | A152_contig_1379_3176 | 3716628 | 3717902 | - | GH171 |
| TC | A152_contig_1379 | A152_contig_1379_3177 | 3717947 | 3719245 | - | 2.A.1.25.5 |
| pfam | A152_contig_1379 | A152_contig_1379_3178 | 3719261 | 3720574 | - | SpoIID |
| pfam | A152_contig_1379 | A152_contig_1379_3179 | 3720571 | 3721503 | - | DUF4922 | Ap4A_phos_N |
| CAZyme | A152_contig_1379 | A152_contig_1379_3180 | 3721500 | 3722966 | - | GT2 |
| pfam | A152_contig_1379 | A152_contig_1379_3181 | 3723362 | 3725233 | - | Metallophos | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_3182 | 3725345 | 3728395 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A152_contig_1379 | A152_contig_1379_3183 | 3728408 | 3729856 | - | 2.A.21.3.7 |
| CAZyme | A152_contig_1379 | A152_contig_1379_3184 | 3729900 | 3731069 | - | GH171 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_3185 | 3732174 | 3733061 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A152_contig_1379 | A152_contig_1379_3186 | 3733524 | 3737006 | + | 1.B.14.6.1 |
| pfam | A152_contig_1379 | A152_contig_1379_3187 | 3737020 | 3738879 | + | SusD_RagB | SusD-like_3 |
| pfam | A152_contig_1379 | A152_contig_1379_3188 | 3738930 | 3739940 | - | Semialdhyde_dh | Semialdhyde_dhC |
| TC | A152_contig_1379 | A152_contig_1379_3189 | 3740139 | 3742274 | + | 2.A.37.2.5 |
| TC | A152_contig_1379 | A152_contig_1379_3190 | 3742256 | 3742984 | + | 3.A.16.1.3 |
| TC | A152_contig_1379 | A152_contig_1379_3191 | 3742989 | 3743639 | + | 3.A.1.122.2 |
| pfam | A152_contig_1379 | A152_contig_1379_3192 | 3743640 | 3744542 | - | HHH_3 | HHH_3 | HHH_3 |
| TC | A152_contig_1379 | A152_contig_1379_3193 | 3744545 | 3745912 | - | 2.A.22.5.3 |
Gene ID: A152_contig_1379_3176
Type: CAZyme
Location: 3716628 - 3717902 (-)
Type: CAZyme
Location: 3716628 - 3717902 (-)
Gene ID: A152_contig_1379_3177
Type: TC
Location: 3717947 - 3719245 (-)
Type: TC
Location: 3717947 - 3719245 (-)
Gene ID: A152_contig_1379_3178
Type: pfam
Location: 3719261 - 3720574 (-)
Type: pfam
Location: 3719261 - 3720574 (-)
Gene ID: A152_contig_1379_3179
Type: pfam
Location: 3720571 - 3721503 (-)
Type: pfam
Location: 3720571 - 3721503 (-)
Gene ID: A152_contig_1379_3180
Type: CAZyme
Location: 3721500 - 3722966 (-)
Type: CAZyme
Location: 3721500 - 3722966 (-)
Gene ID: A152_contig_1379_3181
Type: pfam
Location: 3723362 - 3725233 (-)
Type: pfam
Location: 3723362 - 3725233 (-)
Gene ID: A152_contig_1379_3182
Type:
Location: 3725345 - 3728395 (-)
Type:
Location: 3725345 - 3728395 (-)
Gene ID: A152_contig_1379_3183
Type: TC
Location: 3728408 - 3729856 (-)
Type: TC
Location: 3728408 - 3729856 (-)
Gene ID: A152_contig_1379_3184
Type: CAZyme
Location: 3729900 - 3731069 (-)
Type: CAZyme
Location: 3729900 - 3731069 (-)
Gene ID: A152_contig_1379_3185
Type:
Location: 3732174 - 3733061 (+)
Type:
Location: 3732174 - 3733061 (+)
Gene ID: A152_contig_1379_3186
Type: TC
Location: 3733524 - 3737006 (+)
Type: TC
Location: 3733524 - 3737006 (+)
Gene ID: A152_contig_1379_3187
Type: pfam
Location: 3737020 - 3738879 (+)
Type: pfam
Location: 3737020 - 3738879 (+)
Gene ID: A152_contig_1379_3188
Type: pfam
Location: 3738930 - 3739940 (-)
Type: pfam
Location: 3738930 - 3739940 (-)
Gene ID: A152_contig_1379_3189
Type: TC
Location: 3740139 - 3742274 (+)
Type: TC
Location: 3740139 - 3742274 (+)
Gene ID: A152_contig_1379_3190
Type: TC
Location: 3742256 - 3742984 (+)
Type: TC
Location: 3742256 - 3742984 (+)
Gene ID: A152_contig_1379_3191
Type: TC
Location: 3742989 - 3743639 (+)
Type: TC
Location: 3742989 - 3743639 (+)
Gene ID: A152_contig_1379_3192
Type: pfam
Location: 3743640 - 3744542 (-)
Type: pfam
Location: 3743640 - 3744542 (-)
Gene ID: A152_contig_1379_3193
Type: TC
Location: 3744545 - 3745912 (-)
Type: TC
Location: 3744545 - 3745912 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.