Cluster: A152.bin_3_CGC29
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: A152.bin_3
- CGC Family ID: CGCFAM_06646
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A152_contig_1379 | A152_contig_1379_1830 | 2091158 | 2092804 | - | 2.A.6.1.8 |
| pfam | A152_contig_1379 | A152_contig_1379_1831 | 2092841 | 2094352 | - | OEP | OEP |
| TC | A152_contig_1379 | A152_contig_1379_1832 | 2094495 | 2098229 | - | 2.A.6.1.8 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_1833 | 2098426 | 2098851 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A152_contig_1379 | A152_contig_1379_1834 | 2098947 | 2099924 | + | GH23 |
| TC | A152_contig_1379 | A152_contig_1379_1835 | 2099962 | 2100861 | + | 1.A.1.24.3 |
| pfam | A152_contig_1379 | A152_contig_1379_1836 | 2100851 | 2106724 | - | DUF3320 | AAA_11 | AAA_11 | AAA_12 | DUF4011 | MTES_1575 |
| pfam | A152_contig_1379 | A152_contig_1379_1837 | 2106843 | 2107214 | - | DUF2809 |
| TC | A152_contig_1379 | A152_contig_1379_1838 | 2107367 | 2108032 | + | 9.B.20.1.4 |
Gene ID: A152_contig_1379_1830
Type: TC
Location: 2091158 - 2092804 (-)
Type: TC
Location: 2091158 - 2092804 (-)
Gene ID: A152_contig_1379_1831
Type: pfam
Location: 2092841 - 2094352 (-)
Type: pfam
Location: 2092841 - 2094352 (-)
Gene ID: A152_contig_1379_1832
Type: TC
Location: 2094495 - 2098229 (-)
Type: TC
Location: 2094495 - 2098229 (-)
Gene ID: A152_contig_1379_1833
Type:
Location: 2098426 - 2098851 (-)
Type:
Location: 2098426 - 2098851 (-)
Gene ID: A152_contig_1379_1834
Type: CAZyme
Location: 2098947 - 2099924 (+)
Type: CAZyme
Location: 2098947 - 2099924 (+)
Gene ID: A152_contig_1379_1835
Type: TC
Location: 2099962 - 2100861 (+)
Type: TC
Location: 2099962 - 2100861 (+)
Gene ID: A152_contig_1379_1836
Type: pfam
Location: 2100851 - 2106724 (-)
Type: pfam
Location: 2100851 - 2106724 (-)
Gene ID: A152_contig_1379_1837
Type: pfam
Location: 2106843 - 2107214 (-)
Type: pfam
Location: 2106843 - 2107214 (-)
Gene ID: A152_contig_1379_1838
Type: TC
Location: 2107367 - 2108032 (+)
Type: TC
Location: 2107367 - 2108032 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.