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Cluster: A152.bin_3_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A152_contig_1379 A152_contig_1379_1472 1627092 1628261 - 1.A.23.4.5
pfam A152_contig_1379 A152_contig_1379_1473 1628399 1629055 - TAL_FSA
CAZyme A152_contig_1379 A152_contig_1379_1474 1629121 1630938 - GH29
CAZyme A152_contig_1379 A152_contig_1379_1475 1631094 1634156 - GH2
CAZyme A152_contig_1379 A152_contig_1379_1476 1634267 1636585 - GH20
sulfatase A152_contig_1379 A152_contig_1379_1477 1636603 1638186 - S1_11
sulfatase A152_contig_1379 A152_contig_1379_1478 1638595 1640061 + S1_20
CAZyme A152_contig_1379 A152_contig_1379_1479 1640163 1641812 - GH20
Gene ID: A152_contig_1379_1472
Type: TC
Location: 1627092 - 1628261 (-)
Gene ID: A152_contig_1379_1473
Type: pfam
Location: 1628399 - 1629055 (-)
Gene ID: A152_contig_1379_1474
Type: CAZyme
Location: 1629121 - 1630938 (-)
Gene ID: A152_contig_1379_1475
Type: CAZyme
Location: 1631094 - 1634156 (-)
Gene ID: A152_contig_1379_1476
Type: CAZyme
Location: 1634267 - 1636585 (-)
Gene ID: A152_contig_1379_1477
Type: sulfatase
Location: 1636603 - 1638186 (-)
Gene ID: A152_contig_1379_1478
Type: sulfatase
Location: 1638595 - 1640061 (+)
Gene ID: A152_contig_1379_1479
Type: CAZyme
Location: 1640163 - 1641812 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A152_contig_1379_1473 vegan > omnivore 1.47771 0.02736

🧭 Explore Read Mapping of CGC

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