Cluster: A152.bin_3_CGC2
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 8
- Substrate: host glycan
- Genome ID: A152.bin_3
- CGC Family ID: CGCFAM_00194
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A152_contig_1379 | A152_contig_1379_11 | 7570 | 8139 | + | 1.B.14.6.1 |
| TC | A152_contig_1379 | A152_contig_1379_12 | 8165 | 8899 | + | 1.B.14.6.1 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_13 | 8924 | 9121 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A152_contig_1379 | A152_contig_1379_14 | 9167 | 10351 | + | 1.B.14.6.1 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_15 | 10348 | 10905 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A152_contig_1379 | A152_contig_1379_16 | 10923 | 12485 | + | 8.A.46.1.4 |
| TC | A152_contig_1379 | A152_contig_1379_17 | 12562 | 14139 | - | 8.A.46.1.4 |
| TC | A152_contig_1379 | A152_contig_1379_18 | 14168 | 16717 | - | 1.B.14.6.1 |
| TC | A152_contig_1379 | A152_contig_1379_19 | 16731 | 17438 | - | 1.B.14.6.1 |
| TC | A152_contig_1379 | A152_contig_1379_20 | 18189 | 21359 | + | 1.B.14.6.1 |
| pfam | A152_contig_1379 | A152_contig_1379_21 | 21371 | 23386 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_22 | 23491 | 23604 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A152_contig_1379 | A152_contig_1379_23 | 23898 | 25532 | + | CBM93 | GH33 |
| CAZyme | A152_contig_1379 | A152_contig_1379_24 | 25565 | 27577 | + | GH20 |
| sulfatase | A152_contig_1379 | A152_contig_1379_25 | 27619 | 28260 | + | S1_16 |
| CAZyme | A152_contig_1379 | A152_contig_1379_26 | 28257 | 30329 | + | CE20 |
| CAZyme | A152_contig_1379 | A152_contig_1379_27 | 30351 | 32921 | + | GH2 |
| CAZyme | A152_contig_1379 | A152_contig_1379_28 | 32941 | 35265 | + | CBM32 | GH20 |
| pfam | A152_contig_1379 | A152_contig_1379_29 | 35276 | 36490 | + | NANM | NANM |
| CAZyme | A152_contig_1379 | A152_contig_1379_30 | 36558 | 38630 | + | GH20 |
| CAZyme | A152_contig_1379 | A152_contig_1379_31 | 38693 | 40942 | + | GH92 |
| CAZyme | A152_contig_1379 | A152_contig_1379_32 | 40956 | 43457 | + | GH2 |
| TC | A152_contig_1379 | A152_contig_1379_33 | 43553 | 46297 | + | 1.B.14.6.1 |
Gene ID: A152_contig_1379_11
Type: TC
Location: 7570 - 8139 (+)
Type: TC
Location: 7570 - 8139 (+)
Gene ID: A152_contig_1379_12
Type: TC
Location: 8165 - 8899 (+)
Type: TC
Location: 8165 - 8899 (+)
Gene ID: A152_contig_1379_13
Type:
Location: 8924 - 9121 (-)
Type:
Location: 8924 - 9121 (-)
Gene ID: A152_contig_1379_14
Type: TC
Location: 9167 - 10351 (+)
Type: TC
Location: 9167 - 10351 (+)
Gene ID: A152_contig_1379_15
Type:
Location: 10348 - 10905 (+)
Type:
Location: 10348 - 10905 (+)
Gene ID: A152_contig_1379_16
Type: TC
Location: 10923 - 12485 (+)
Type: TC
Location: 10923 - 12485 (+)
Gene ID: A152_contig_1379_17
Type: TC
Location: 12562 - 14139 (-)
Type: TC
Location: 12562 - 14139 (-)
Gene ID: A152_contig_1379_18
Type: TC
Location: 14168 - 16717 (-)
Type: TC
Location: 14168 - 16717 (-)
Gene ID: A152_contig_1379_19
Type: TC
Location: 16731 - 17438 (-)
Type: TC
Location: 16731 - 17438 (-)
Gene ID: A152_contig_1379_20
Type: TC
Location: 18189 - 21359 (+)
Type: TC
Location: 18189 - 21359 (+)
Gene ID: A152_contig_1379_21
Type: pfam
Location: 21371 - 23386 (+)
Type: pfam
Location: 21371 - 23386 (+)
Gene ID: A152_contig_1379_22
Type:
Location: 23491 - 23604 (-)
Type:
Location: 23491 - 23604 (-)
Gene ID: A152_contig_1379_23
Type: CAZyme
Location: 23898 - 25532 (+)
Type: CAZyme
Location: 23898 - 25532 (+)
Gene ID: A152_contig_1379_24
Type: CAZyme
Location: 25565 - 27577 (+)
Type: CAZyme
Location: 25565 - 27577 (+)
Gene ID: A152_contig_1379_25
Type: sulfatase
Location: 27619 - 28260 (+)
Type: sulfatase
Location: 27619 - 28260 (+)
Gene ID: A152_contig_1379_26
Type: CAZyme
Location: 28257 - 30329 (+)
Type: CAZyme
Location: 28257 - 30329 (+)
Gene ID: A152_contig_1379_27
Type: CAZyme
Location: 30351 - 32921 (+)
Type: CAZyme
Location: 30351 - 32921 (+)
Gene ID: A152_contig_1379_28
Type: CAZyme
Location: 32941 - 35265 (+)
Type: CAZyme
Location: 32941 - 35265 (+)
Gene ID: A152_contig_1379_29
Type: pfam
Location: 35276 - 36490 (+)
Type: pfam
Location: 35276 - 36490 (+)
Gene ID: A152_contig_1379_30
Type: CAZyme
Location: 36558 - 38630 (+)
Type: CAZyme
Location: 36558 - 38630 (+)
Gene ID: A152_contig_1379_31
Type: CAZyme
Location: 38693 - 40942 (+)
Type: CAZyme
Location: 38693 - 40942 (+)
Gene ID: A152_contig_1379_32
Type: CAZyme
Location: 40956 - 43457 (+)
Type: CAZyme
Location: 40956 - 43457 (+)
Gene ID: A152_contig_1379_33
Type: TC
Location: 43553 - 46297 (+)
Type: TC
Location: 43553 - 46297 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.