Cluster: A152.bin_3_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: A152.bin_3
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A152_contig_1379 | A152_contig_1379_1149 | 1272488 | 1273492 | + | GT2 |
| pfam | A152_contig_1379 | A152_contig_1379_1150 | 1273506 | 1274786 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | A152_contig_1379 | A152_contig_1379_1151 | 1274786 | 1275736 | + | GT2 |
| TC | A152_contig_1379 | A152_contig_1379_1152 | 1275756 | 1277141 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_1153 | 1277144 | 1278034 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A152_contig_1379 | A152_contig_1379_1154 | 1278063 | 1279253 | + | Wzy_C |
| CAZyme | A152_contig_1379 | A152_contig_1379_1155 | 1279316 | 1280485 | + | GT4 |
| CAZyme | A152_contig_1379 | A152_contig_1379_1156 | 1280497 | 1281300 | + | GT2 |
| CAZyme | A152_contig_1379 | A152_contig_1379_1157 | 1281306 | 1282259 | + | GT2 |
| CAZyme | A152_contig_1379 | A152_contig_1379_1158 | 1282280 | 1283353 | + | GT4 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_1159 | 1283573 | 1283860 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A152_contig_1379 | A152_contig_1379_1160 | 1284222 | 1284941 | + | GT26 |
Gene ID: A152_contig_1379_1149
Type: CAZyme
Location: 1272488 - 1273492 (+)
Type: CAZyme
Location: 1272488 - 1273492 (+)
Gene ID: A152_contig_1379_1150
Type: pfam
Location: 1273506 - 1274786 (+)
Type: pfam
Location: 1273506 - 1274786 (+)
Gene ID: A152_contig_1379_1151
Type: CAZyme
Location: 1274786 - 1275736 (+)
Type: CAZyme
Location: 1274786 - 1275736 (+)
Gene ID: A152_contig_1379_1152
Type: TC
Location: 1275756 - 1277141 (+)
Type: TC
Location: 1275756 - 1277141 (+)
Gene ID: A152_contig_1379_1153
Type:
Location: 1277144 - 1278034 (+)
Type:
Location: 1277144 - 1278034 (+)
Gene ID: A152_contig_1379_1154
Type: pfam
Location: 1278063 - 1279253 (+)
Type: pfam
Location: 1278063 - 1279253 (+)
Gene ID: A152_contig_1379_1155
Type: CAZyme
Location: 1279316 - 1280485 (+)
Type: CAZyme
Location: 1279316 - 1280485 (+)
Gene ID: A152_contig_1379_1156
Type: CAZyme
Location: 1280497 - 1281300 (+)
Type: CAZyme
Location: 1280497 - 1281300 (+)
Gene ID: A152_contig_1379_1157
Type: CAZyme
Location: 1281306 - 1282259 (+)
Type: CAZyme
Location: 1281306 - 1282259 (+)
Gene ID: A152_contig_1379_1158
Type: CAZyme
Location: 1282280 - 1283353 (+)
Type: CAZyme
Location: 1282280 - 1283353 (+)
Gene ID: A152_contig_1379_1159
Type:
Location: 1283573 - 1283860 (+)
Type:
Location: 1283573 - 1283860 (+)
Gene ID: A152_contig_1379_1160
Type: CAZyme
Location: 1284222 - 1284941 (+)
Type: CAZyme
Location: 1284222 - 1284941 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.