Cluster: A152.bin_3_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: A152.bin_3
- CGC Family ID: CGCFAM_00667
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A152_contig_1379 | A152_contig_1379_1093 | 1201799 | 1202587 | - | 3.A.1.11.8 |
| TC | A152_contig_1379 | A152_contig_1379_1094 | 1202581 | 1203378 | - | 3.A.1.11.8 |
| TC | A152_contig_1379 | A152_contig_1379_1095 | 1203396 | 1204775 | - | 3.A.1.11.8 |
| pfam | A152_contig_1379 | A152_contig_1379_1096 | 1204883 | 1206022 | + | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369 |
| NULL(UNKNOWN) | A152_contig_1379 | A152_contig_1379_1097 | 1206194 | 1206844 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A152_contig_1379 | A152_contig_1379_1098 | 1206946 | 1209510 | - | GT35 |
| CAZyme | A152_contig_1379 | A152_contig_1379_1099 | 1209544 | 1211205 | - | GT3 |
| TC | A152_contig_1379 | A152_contig_1379_1100 | 1211441 | 1211902 | - | 3.A.2.2.2 |
| TC | A152_contig_1379 | A152_contig_1379_1101 | 1211956 | 1213773 | - | 3.A.2.2.2 |
| pfam | A152_contig_1379 | A152_contig_1379_1102 | 1213770 | 1214375 | - | ATP-synt_D |
| TC | A152_contig_1379 | A152_contig_1379_1103 | 1214388 | 1215707 | - | 3.A.2.3.3 |
| TC | A152_contig_1379 | A152_contig_1379_1104 | 1215737 | 1217494 | - | 3.A.2.3.3 |
Gene ID: A152_contig_1379_1093
Type: TC
Location: 1201799 - 1202587 (-)
Type: TC
Location: 1201799 - 1202587 (-)
Gene ID: A152_contig_1379_1094
Type: TC
Location: 1202581 - 1203378 (-)
Type: TC
Location: 1202581 - 1203378 (-)
Gene ID: A152_contig_1379_1095
Type: TC
Location: 1203396 - 1204775 (-)
Type: TC
Location: 1203396 - 1204775 (-)
Gene ID: A152_contig_1379_1096
Type: pfam
Location: 1204883 - 1206022 (+)
Type: pfam
Location: 1204883 - 1206022 (+)
Gene ID: A152_contig_1379_1097
Type:
Location: 1206194 - 1206844 (-)
Type:
Location: 1206194 - 1206844 (-)
Gene ID: A152_contig_1379_1098
Type: CAZyme
Location: 1206946 - 1209510 (-)
Type: CAZyme
Location: 1206946 - 1209510 (-)
Gene ID: A152_contig_1379_1099
Type: CAZyme
Location: 1209544 - 1211205 (-)
Type: CAZyme
Location: 1209544 - 1211205 (-)
Gene ID: A152_contig_1379_1100
Type: TC
Location: 1211441 - 1211902 (-)
Type: TC
Location: 1211441 - 1211902 (-)
Gene ID: A152_contig_1379_1101
Type: TC
Location: 1211956 - 1213773 (-)
Type: TC
Location: 1211956 - 1213773 (-)
Gene ID: A152_contig_1379_1102
Type: pfam
Location: 1213770 - 1214375 (-)
Type: pfam
Location: 1213770 - 1214375 (-)
Gene ID: A152_contig_1379_1103
Type: TC
Location: 1214388 - 1215707 (-)
Type: TC
Location: 1214388 - 1215707 (-)
Gene ID: A152_contig_1379_1104
Type: TC
Location: 1215737 - 1217494 (-)
Type: TC
Location: 1215737 - 1217494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A152_contig_1379_1094 | vegetarian > omnivore | 1.54261 | 0.01882 |