Cluster: A15.bin_6_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A15.bin_6
- CGC Family ID: CGCFAM_00163
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A15_contig_846 | A15_contig_846_266 | 281394 | 282737 | + | 2.A.66.1.33 |
| TC | A15_contig_846 | A15_contig_846_267 | 283034 | 284395 | + | 2.A.66.1.33 |
| CAZyme | A15_contig_846 | A15_contig_846_268 | 284486 | 285334 | - | CE4 |
Gene ID: A15_contig_846_266
Type: TC
Location: 281394 - 282737 (+)
Type: TC
Location: 281394 - 282737 (+)
Gene ID: A15_contig_846_267
Type: TC
Location: 283034 - 284395 (+)
Type: TC
Location: 283034 - 284395 (+)
Gene ID: A15_contig_846_268
Type: CAZyme
Location: 284486 - 285334 (-)
Type: CAZyme
Location: 284486 - 285334 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A15_contig_846_266 | vegan > omnivore | 4.31529 | 0.00409 |
| A15_contig_846_266 | vegetarian > omnivore | 2.09662 | 0.00000 |