Cluster: A15.bin_6_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A15.bin_6
- CGC Family ID: CGCFAM_03057
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A15_contig_652 | A15_contig_652_290 | 336203 | 337507 | + | GH1 |
| NULL(UNKNOWN) | A15_contig_652 | A15_contig_652_291 | 337525 | 337764 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | A15_contig_652 | A15_contig_652_292 | 337784 | 338989 | + | HTH_AraC | HTH_AraC |
| TC | A15_contig_652 | A15_contig_652_293 | 339232 | 340707 | + | 2.A.2.3.5 |
| CAZyme | A15_contig_652 | A15_contig_652_294 | 340713 | 342920 | + | GH2 |
Gene ID: A15_contig_652_290
Type: CAZyme
Location: 336203 - 337507 (+)
Type: CAZyme
Location: 336203 - 337507 (+)
Gene ID: A15_contig_652_291
Type:
Location: 337525 - 337764 (+)
Type:
Location: 337525 - 337764 (+)
Gene ID: A15_contig_652_292
Type: TF
Location: 337784 - 338989 (+)
Type: TF
Location: 337784 - 338989 (+)
Gene ID: A15_contig_652_293
Type: TC
Location: 339232 - 340707 (+)
Type: TC
Location: 339232 - 340707 (+)
Gene ID: A15_contig_652_294
Type: CAZyme
Location: 340713 - 342920 (+)
Type: CAZyme
Location: 340713 - 342920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.