Cluster: A15.bin_6_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A15.bin_6
- CGC Family ID: CGCFAM_04322
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A15_contig_313 | A15_contig_313_1206 | 1351765 | 1353855 | + | 3.A.16.1.2 |
| pfam | A15_contig_313 | A15_contig_313_1207 | 1353994 | 1355844 | + | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| pfam | A15_contig_313 | A15_contig_313_1208 | 1355931 | 1356860 | + | Hpr_kinase_N | Hpr_kinase_C |
| CAZyme | A15_contig_313 | A15_contig_313_1209 | 1356999 | 1359572 | - | GT51 |
Gene ID: A15_contig_313_1206
Type: TC
Location: 1351765 - 1353855 (+)
Type: TC
Location: 1351765 - 1353855 (+)
Gene ID: A15_contig_313_1207
Type: pfam
Location: 1353994 - 1355844 (+)
Type: pfam
Location: 1353994 - 1355844 (+)
Gene ID: A15_contig_313_1208
Type: pfam
Location: 1355931 - 1356860 (+)
Type: pfam
Location: 1355931 - 1356860 (+)
Gene ID: A15_contig_313_1209
Type: CAZyme
Location: 1356999 - 1359572 (-)
Type: CAZyme
Location: 1356999 - 1359572 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.