Cluster: A15.bin_6_CGC38
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: A15.bin_6
- CGC Family ID: CGCFAM_04171
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A15_contig_313 | A15_contig_313_835 | 925723 | 927978 | + | GT35 |
| CAZyme | A15_contig_313 | A15_contig_313_836 | 928030 | 929502 | + | GH77 |
| TC | A15_contig_313 | A15_contig_313_837 | 929597 | 930535 | - | 3.A.1.121.4 |
Gene ID: A15_contig_313_835
Type: CAZyme
Location: 925723 - 927978 (+)
Type: CAZyme
Location: 925723 - 927978 (+)
Gene ID: A15_contig_313_836
Type: CAZyme
Location: 928030 - 929502 (+)
Type: CAZyme
Location: 928030 - 929502 (+)
Gene ID: A15_contig_313_837
Type: TC
Location: 929597 - 930535 (-)
Type: TC
Location: 929597 - 930535 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A15_contig_313_836 | vegan > omnivore | 1.19357 | 0.00409 |
| A15_contig_313_836 | vegetarian > omnivore | 1.55707 | 0.00000 |