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Cluster: A15.bin_6_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A15_contig_313 A15_contig_313_813 899425 900852 + 2.A.1.3.30
TF A15_contig_313 A15_contig_313_814 900967 901809 - HTH_AraC | HTH_AraC
pfam A15_contig_313 A15_contig_313_815 901986 902849 + AP_endonuc_2
TC A15_contig_313 A15_contig_313_816 902892 904262 + 2.A.2.3.2
CAZyme A15_contig_313 A15_contig_313_817 904341 905447 + GH179
pfam A15_contig_313 A15_contig_313_818 905528 906448 + AP_endonuc_2
STP A15_contig_313 A15_contig_313_819 906621 907715 + Peripla_BP_1
TC A15_contig_313 A15_contig_313_820 908022 909521 + 3.A.1.2.1
TC A15_contig_313 A15_contig_313_821 909524 910549 + 3.A.1.2.1
Gene ID: A15_contig_313_813
Type: TC
Location: 899425 - 900852 (+)
Gene ID: A15_contig_313_814
Type: TF
Location: 900967 - 901809 (-)
Gene ID: A15_contig_313_815
Type: pfam
Location: 901986 - 902849 (+)
Gene ID: A15_contig_313_816
Type: TC
Location: 902892 - 904262 (+)
Gene ID: A15_contig_313_817
Type: CAZyme
Location: 904341 - 905447 (+)
Gene ID: A15_contig_313_818
Type: pfam
Location: 905528 - 906448 (+)
Gene ID: A15_contig_313_819
Type: STP
Location: 906621 - 907715 (+)
Gene ID: A15_contig_313_820
Type: TC
Location: 908022 - 909521 (+)
Gene ID: A15_contig_313_821
Type: TC
Location: 909524 - 910549 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_313_818 vegan > omnivore 1.86086 0.00409

🧭 Explore Read Mapping of CGC

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