Cluster: A15.bin_6_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A15.bin_6
- CGC Family ID: CGCFAM_01546
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A15_contig_313 | A15_contig_313_717 | 784956 | 786365 | + | 2.A.40.2.1 |
| pfam | A15_contig_313 | A15_contig_313_718 | 786696 | 787535 | + | AP_endonuc_2 |
| CAZyme | A15_contig_313 | A15_contig_313_719 | 787597 | 788877 | + | GH179 |
| pfam | A15_contig_313 | A15_contig_313_720 | 788994 | 790460 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| TC | A15_contig_313 | A15_contig_313_721 | 790470 | 792698 | + | 3.A.11.3.1 |
Gene ID: A15_contig_313_717
Type: TC
Location: 784956 - 786365 (+)
Type: TC
Location: 784956 - 786365 (+)
Gene ID: A15_contig_313_718
Type: pfam
Location: 786696 - 787535 (+)
Type: pfam
Location: 786696 - 787535 (+)
Gene ID: A15_contig_313_719
Type: CAZyme
Location: 787597 - 788877 (+)
Type: CAZyme
Location: 787597 - 788877 (+)
Gene ID: A15_contig_313_720
Type: pfam
Location: 788994 - 790460 (+)
Type: pfam
Location: 788994 - 790460 (+)
Gene ID: A15_contig_313_721
Type: TC
Location: 790470 - 792698 (+)
Type: TC
Location: 790470 - 792698 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.