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Cluster: A15.bin_6_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A15_contig_313 A15_contig_313_648 691457 692596 - CE9
pfam A15_contig_313 A15_contig_313_649 692924 693769 + PRD | PRD | CAT_RBD
TC A15_contig_313 A15_contig_313_650 693783 694271 + 4.A.1.2.11
TC A15_contig_313 A15_contig_313_651 694401 695870 + 4.A.1.1.7
TF A15_contig_313 A15_contig_313_652 696060 697670 + HTH_AraC | HTH_AraC
TC A15_contig_313 A15_contig_313_653 697667 699478 + 8.A.59.2.1
STP A15_contig_313 A15_contig_313_654 699471 700466 + Peripla_BP_1
TC A15_contig_313 A15_contig_313_655 700622 701596 + 3.A.1.2.11
TC A15_contig_313 A15_contig_313_656 701648 703144 + 3.A.1.2.20
TC A15_contig_313 A15_contig_313_657 703158 704162 + 3.A.1.2.11
Gene ID: A15_contig_313_648
Type: CAZyme
Location: 691457 - 692596 (-)
Gene ID: A15_contig_313_649
Type: pfam
Location: 692924 - 693769 (+)
Gene ID: A15_contig_313_650
Type: TC
Location: 693783 - 694271 (+)
Gene ID: A15_contig_313_651
Type: TC
Location: 694401 - 695870 (+)
Gene ID: A15_contig_313_652
Type: TF
Location: 696060 - 697670 (+)
Gene ID: A15_contig_313_653
Type: TC
Location: 697667 - 699478 (+)
Gene ID: A15_contig_313_654
Type: STP
Location: 699471 - 700466 (+)
Gene ID: A15_contig_313_655
Type: TC
Location: 700622 - 701596 (+)
Gene ID: A15_contig_313_656
Type: TC
Location: 701648 - 703144 (+)
Gene ID: A15_contig_313_657
Type: TC
Location: 703158 - 704162 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_313_648 vegan > omnivore 2.12881 0.00409
A15_contig_313_650 vegan > omnivore 14.88409 0.00409
A15_contig_313_654 vegan > omnivore 2.14053 0.00409

🧭 Explore Read Mapping of CGC

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