Cluster: A15.bin_6_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: A15.bin_6
- CGC Family ID: CGCFAM_00389
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A15_contig_313 | A15_contig_313_112 | 103687 | 105555 | + | 4.A.1.2.6 |
| CAZyme | A15_contig_313 | A15_contig_313_113 | 105688 | 106965 | + | GH140 |
| CAZyme | A15_contig_313 | A15_contig_313_114 | 106977 | 108383 | + | GH1 |
| TF | A15_contig_313 | A15_contig_313_115 | 108458 | 109651 | - | HTH_AraC | HTH_AraC |
| CAZyme | A15_contig_313 | A15_contig_313_116 | 109691 | 110737 | - | GH179 |
Gene ID: A15_contig_313_112
Type: TC
Location: 103687 - 105555 (+)
Type: TC
Location: 103687 - 105555 (+)
Gene ID: A15_contig_313_113
Type: CAZyme
Location: 105688 - 106965 (+)
Type: CAZyme
Location: 105688 - 106965 (+)
Gene ID: A15_contig_313_114
Type: CAZyme
Location: 106977 - 108383 (+)
Type: CAZyme
Location: 106977 - 108383 (+)
Gene ID: A15_contig_313_115
Type: TF
Location: 108458 - 109651 (-)
Type: TF
Location: 108458 - 109651 (-)
Gene ID: A15_contig_313_116
Type: CAZyme
Location: 109691 - 110737 (-)
Type: CAZyme
Location: 109691 - 110737 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Species
Schaedlerella hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.