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Cluster: A15.bin_6_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A15_contig_555 A15_contig_555_110 128338 129840 - 3.A.1.2.1
TF A15_contig_555 A15_contig_555_111 130027 131079 + HTH_AraC
CAZyme A15_contig_555 A15_contig_555_112 131142 133400 - GH3
CAZyme A15_contig_555 A15_contig_555_113 133499 136294 - CBM67 | GH78
CAZyme A15_contig_555 A15_contig_555_114 136495 138183 - GH3
NULL(UNKNOWN) A15_contig_555 A15_contig_555_115 138298 138450 - NULL(UNKNOWN)
[View Structural Homologs]
STP A15_contig_555 A15_contig_555_116 138553 139731 - Aminotran_1_2
TC A15_contig_555 A15_contig_555_117 139779 141068 - 2.A.1.52.2
TC A15_contig_555 A15_contig_555_118 141203 142711 - 2.A.15.2.3
Gene ID: A15_contig_555_110
Type: TC
Location: 128338 - 129840 (-)
Gene ID: A15_contig_555_111
Type: TF
Location: 130027 - 131079 (+)
Gene ID: A15_contig_555_112
Type: CAZyme
Location: 131142 - 133400 (-)
Gene ID: A15_contig_555_113
Type: CAZyme
Location: 133499 - 136294 (-)
Gene ID: A15_contig_555_114
Type: CAZyme
Location: 136495 - 138183 (-)
Gene ID: A15_contig_555_115
Type:
Location: 138298 - 138450 (-)
Gene ID: A15_contig_555_116
Type: STP
Location: 138553 - 139731 (-)
Gene ID: A15_contig_555_117
Type: TC
Location: 139779 - 141068 (-)
Gene ID: A15_contig_555_118
Type: TC
Location: 141203 - 142711 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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