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Cluster: A15.bin_6_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A15_contig_846 A15_contig_846_332 363309 364691 + 3.A.1.1.9
TC A15_contig_846 A15_contig_846_333 364703 365611 + 3.A.1.1.29
CAZyme A15_contig_846 A15_contig_846_334 365843 368239 + GH39
pfam A15_contig_846 A15_contig_846_335 368435 369361 + Flavodoxin_2 | FMN_red
pfam A15_contig_846 A15_contig_846_336 369595 370566 + FMN_red
TC A15_contig_846 A15_contig_846_337 370620 372014 + 2.A.2.3.2
NULL(UNKNOWN) A15_contig_846 A15_contig_846_338 372113 372388 - NULL(UNKNOWN)
[View Structural Homologs]
STP A15_contig_846 A15_contig_846_339 372498 374552 - CHASE | HATPase_c | HisKA | Response_reg
TC A15_contig_846 A15_contig_846_340 374879 376219 + 2.A.66.1.22
pfam A15_contig_846 A15_contig_846_341 376288 378294 - MCRA | NAD_binding_8
TC A15_contig_846 A15_contig_846_342 378633 380030 + 2.A.22.5.3
Gene ID: A15_contig_846_332
Type: TC
Location: 363309 - 364691 (+)
Gene ID: A15_contig_846_333
Type: TC
Location: 364703 - 365611 (+)
Gene ID: A15_contig_846_334
Type: CAZyme
Location: 365843 - 368239 (+)
Gene ID: A15_contig_846_335
Type: pfam
Location: 368435 - 369361 (+)
Gene ID: A15_contig_846_336
Type: pfam
Location: 369595 - 370566 (+)
Gene ID: A15_contig_846_337
Type: TC
Location: 370620 - 372014 (+)
Gene ID: A15_contig_846_338
Type:
Location: 372113 - 372388 (-)
Gene ID: A15_contig_846_339
Type: STP
Location: 372498 - 374552 (-)
Gene ID: A15_contig_846_340
Type: TC
Location: 374879 - 376219 (+)
Gene ID: A15_contig_846_341
Type: pfam
Location: 376288 - 378294 (-)
Gene ID: A15_contig_846_342
Type: TC
Location: 378633 - 380030 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_846_336 vegan > omnivore 1.98537 0.00409
A15_contig_846_337 vegan > omnivore 1.00977 0.00409

🧭 Explore Read Mapping of CGC

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