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Cluster: A15.bin_6_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A15_contig_846 A15_contig_846_307 332160 332723 + 2.A.51.1.1
TC A15_contig_846 A15_contig_846_308 332720 333280 + 2.A.51.1.6
pfam A15_contig_846 A15_contig_846_309 333487 334464 + FMN_red
CAZyme A15_contig_846 A15_contig_846_310 334769 337171 + GH39
TC A15_contig_846 A15_contig_846_311 337220 338599 + 2.A.66.1.33
TC A15_contig_846 A15_contig_846_312 338903 340189 + 2.A.2.3.3
pfam A15_contig_846 A15_contig_846_313 340373 341293 + AP_endonuc_2
CAZyme A15_contig_846 A15_contig_846_314 341449 342561 + GH179
Gene ID: A15_contig_846_307
Type: TC
Location: 332160 - 332723 (+)
Gene ID: A15_contig_846_308
Type: TC
Location: 332720 - 333280 (+)
Gene ID: A15_contig_846_309
Type: pfam
Location: 333487 - 334464 (+)
Gene ID: A15_contig_846_310
Type: CAZyme
Location: 334769 - 337171 (+)
Gene ID: A15_contig_846_311
Type: TC
Location: 337220 - 338599 (+)
Gene ID: A15_contig_846_312
Type: TC
Location: 338903 - 340189 (+)
Gene ID: A15_contig_846_313
Type: pfam
Location: 340373 - 341293 (+)
Gene ID: A15_contig_846_314
Type: CAZyme
Location: 341449 - 342561 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_846_314 vegan > omnivore 1.51557 0.00409

🧭 Explore Read Mapping of CGC

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