dbCAN Logo

Cluster: A15.bin_6_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A15_contig_652 A15_contig_652_152 173832 176441 + 3.A.23.1.1
TC A15_contig_652 A15_contig_652_153 176622 177398 + 4.A.6.1.13
TC A15_contig_652 A15_contig_652_154 177385 178194 + 4.A.6.1.13
TC A15_contig_652 A15_contig_652_155 178223 178702 + 4.A.6.1.18
pfam A15_contig_652 A15_contig_652_156 178717 179136 + EIIA-man
CAZyme A15_contig_652 A15_contig_652_157 179129 180457 + GH32
Gene ID: A15_contig_652_152
Type: TC
Location: 173832 - 176441 (+)
Gene ID: A15_contig_652_153
Type: TC
Location: 176622 - 177398 (+)
Gene ID: A15_contig_652_154
Type: TC
Location: 177385 - 178194 (+)
Gene ID: A15_contig_652_155
Type: TC
Location: 178223 - 178702 (+)
Gene ID: A15_contig_652_156
Type: pfam
Location: 178717 - 179136 (+)
Gene ID: A15_contig_652_157
Type: CAZyme
Location: 179129 - 180457 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A15_contig_652_153 vegan > omnivore 4.10156 0.00409
A15_contig_652_154 vegan > omnivore 2.86240 0.00409
A15_contig_652_155 vegan > omnivore 2.73883 0.00409
A15_contig_652_156 vegan > omnivore 3.13547 0.00409

🧭 Explore Read Mapping of CGC

← Back to Cluster List