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Cluster: A142.bin_5_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A142_contig_257 A142_contig_257_362 368292 369221 - 3.A.1.144.2
STP A142_contig_257 A142_contig_257_363 369236 369820 - HD
TF A142_contig_257 A142_contig_257_364 369957 370772 - HTH_5
TC A142_contig_257 A142_contig_257_365 370907 371791 - 2.A.115.1.5
NULL(UNKNOWN) A142_contig_257 A142_contig_257_366 371913 372224 - NULL(UNKNOWN)
[View Structural Homologs]
pfam A142_contig_257 A142_contig_257_367 372221 373060 - AP_endonuc_2
CAZyme A142_contig_257 A142_contig_257_368 373092 374144 - GH179
Gene ID: A142_contig_257_362
Type: TC
Location: 368292 - 369221 (-)
Gene ID: A142_contig_257_363
Type: STP
Location: 369236 - 369820 (-)
Gene ID: A142_contig_257_364
Type: TF
Location: 369957 - 370772 (-)
Gene ID: A142_contig_257_365
Type: TC
Location: 370907 - 371791 (-)
Gene ID: A142_contig_257_366
Type:
Location: 371913 - 372224 (-)
Gene ID: A142_contig_257_367
Type: pfam
Location: 372221 - 373060 (-)
Gene ID: A142_contig_257_368
Type: CAZyme
Location: 373092 - 374144 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A142_contig_257_368 vegetarian > vegan 1.27660 0.00029

🧭 Explore Read Mapping of CGC

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