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Cluster: A142.bin_5_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A142_contig_257 A142_contig_257_233 246152 247387 + GT4
pfam A142_contig_257 A142_contig_257_234 247398 248492 + EpsG
CAZyme A142_contig_257 A142_contig_257_235 248508 249641 + GT4
CAZyme A142_contig_257 A142_contig_257_236 249607 250518 + GT2
CAZyme A142_contig_257 A142_contig_257_237 250515 251225 + GT32
CAZyme A142_contig_257 A142_contig_257_238 251254 252498 + GT4
CAZyme A142_contig_257 A142_contig_257_239 252455 253447 + GT2
CAZyme A142_contig_257 A142_contig_257_240 253440 254459 + GT2
pfam A142_contig_257 A142_contig_257_241 254440 255651 + PS_pyruv_trans
CAZyme A142_contig_257 A142_contig_257_242 255611 256624 + GT2
CAZyme A142_contig_257 A142_contig_257_243 256590 257552 + GT2
NULL(UNKNOWN) A142_contig_257 A142_contig_257_244 257555 259126 + NULL(UNKNOWN)
[View Structural Homologs]
TC A142_contig_257 A142_contig_257_245 259371 260762 + 2.A.66.1.33
CAZyme A142_contig_257 A142_contig_257_246 261239 262705 + GH51_1
pfam A142_contig_257 A142_contig_257_247 262705 262959 + DUF6171
TC A142_contig_257 A142_contig_257_248 263099 263938 + 2.A.119.2.1
STP A142_contig_257 A142_contig_257_249 264058 265350 - B12-binding
TC A142_contig_257 A142_contig_257_250 265370 267298 - 3.A.1.120.6
Gene ID: A142_contig_257_233
Type: CAZyme
Location: 246152 - 247387 (+)
Gene ID: A142_contig_257_234
Type: pfam
Location: 247398 - 248492 (+)
Gene ID: A142_contig_257_235
Type: CAZyme
Location: 248508 - 249641 (+)
Gene ID: A142_contig_257_236
Type: CAZyme
Location: 249607 - 250518 (+)
Gene ID: A142_contig_257_237
Type: CAZyme
Location: 250515 - 251225 (+)
Gene ID: A142_contig_257_238
Type: CAZyme
Location: 251254 - 252498 (+)
Gene ID: A142_contig_257_239
Type: CAZyme
Location: 252455 - 253447 (+)
Gene ID: A142_contig_257_240
Type: CAZyme
Location: 253440 - 254459 (+)
Gene ID: A142_contig_257_241
Type: pfam
Location: 254440 - 255651 (+)
Gene ID: A142_contig_257_242
Type: CAZyme
Location: 255611 - 256624 (+)
Gene ID: A142_contig_257_243
Type: CAZyme
Location: 256590 - 257552 (+)
Gene ID: A142_contig_257_244
Type:
Location: 257555 - 259126 (+)
Gene ID: A142_contig_257_245
Type: TC
Location: 259371 - 260762 (+)
Gene ID: A142_contig_257_246
Type: CAZyme
Location: 261239 - 262705 (+)
Gene ID: A142_contig_257_247
Type: pfam
Location: 262705 - 262959 (+)
Gene ID: A142_contig_257_248
Type: TC
Location: 263099 - 263938 (+)
Gene ID: A142_contig_257_249
Type: STP
Location: 264058 - 265350 (-)
Gene ID: A142_contig_257_250
Type: TC
Location: 265370 - 267298 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A142_contig_257_233 vegetarian > vegan 1.10909 0.00029
A142_contig_257_234 vegetarian > vegan 1.19265 0.00029
A142_contig_257_240 vegetarian > vegan 1.14804 0.00029
A142_contig_257_244 vegetarian > vegan 1.27792 0.00029
A142_contig_257_246 vegetarian > omnivore 1.42134 0.00845
A142_contig_257_250 vegetarian > vegan 1.11042 0.00029

🧭 Explore Read Mapping of CGC

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